Data DOI: 10.15785/SBGRID/574 | ID: 574
Publication DOI: 10.1038/s42003-018-0121-8
5ZLG Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Shiro Laboratory, University of Hyogo
Release Date: 17 Aug 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/574
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/574 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/574 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/574 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/574 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 574 ; shasum -c files.sha'
Storage requirements: 262G
Biological Sample:
human Dcytb in complex with Zn and ascorbate
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
SPring-8 beamline BL32XU
Data Creation Date:
1 Dec 2016
Related Datasets:
None
Yamashita, K; Ganasen, M; Mauk, GA; Sawai, H; Sugimoto, H; Togashi, H; Shiro, Y. 2018. "X-Ray Diffraction data for: human Dcytb in complex with Zn and ascorbate. PDB Code 5ZLG", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/574.
Small-wedge (5 degrees/crystal) data collected using 5x5 um beam
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Keitaro Yamashita | Depositor | RIKEN SPring-8 Center |
| Menega Ganasen | University of Hyogo | |
| Grant A Mauk | University of British Columbia | |
| Hitomi Sawai | University of Hyogo | |
| Hiroshi Sugimoto | Data Collector | RIKEN SPring-8 Center |
| Hiromi Togashi | RIKEN SPring-8 Center | |
| Yoshitsugu Shiro | PI | University of Hyogo |
600 datasets were merged at 2.8 Å resolution in the published result using KAMO (XDS/XSCALE used for integration/merging); see https://github.com/keitaroyam/yamtbx/wiki/Processing-Dcytb-data-(5ZLE-&-5ZLG)
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
