Data DOI: 10.15785/SBGRID/572 | ID: 572
6BY0 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Buschiazzo Laboratory, Institut Pasteur de Montevideo
Release Date: 30 Mar 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/572
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/572 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/572 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/572 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/572 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 572 ; shasum -c files.sha'
Storage requirements: 21G
Biological Sample:
Catalase HPII from E. coli
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
beamline I04, Diamond Light Source, UK
Data Creation Date:
11 Jul 2017
Related Datasets:
None
Lisa, N; Trajtenberg, F; Buschiazzo, A. 2018. "X-Ray Diffraction data for: Catalase HPII from E. coli. PDB Code 6BY0", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/572.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Alejandro Buschiazzo | Depositor | Lab of Mol & Structural Microbiology, Institut Pasteur de Montevideo |
| Natalia Lisa | Lab of Mol & Structural Microbiology, Institut Pasteur de Montevideo | |
| Felipe Trajtenberg | Data Collector | Lab of Mol & Structural Microbiology, Institut Pasteur de Montevideo |
| Alejandro Buschiazzo | PI | Institut Pasteur de Montevideo |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/572/III_D7_3_####.cbf
Images:
1 - 3600
Beam:
(209.1, 220.93) -> (209.1, 221.01)
Distance:
547.47 -> 546.06
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.74 | 7.43 | 2.74 |
| Low resolution limit | 48.8 | 48.81 | 2.79 |
| Completeness | 98.1 | 98.0 | 97.3 |
| Multiplicity | 5.1 | 5.0 | 5.3 |
| I/sigma | 4.3 | 12.6 | 1.0 |
| Rmerge | 0.243 | 0.078 | 0.951 |
| CC half | 0.956 | 0.991 | 0.609 |
| Anomalous completeness | 94.3 | 93.6 | 94.7 |
| Anomalous multiplicity | 2.6 | 2.6 | 2.6 |
| Cell | 69.18 | 90.19 | 114.81 | 107.08 | 105.7 | 95.88 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/572/III_D7_3_####.cbf
Images:
1 - 3600
Beam:
(209.1, 220.93) -> (209.1, 221.01)
Distance:
547.47 -> 548.49
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.44 | 6.62 | 2.44 |
| Low resolution limit | 80.01 | 80.05 | 2.48 |
| Completeness | 95.9 | 99.7 | 65.9 |
| Multiplicity | 5.0 | 5.1 | 4.4 |
| I/sigma | 3.2 | 6.0 | 1.0 |
| Rmerge | 0.271 | 0.107 | 0.987 |
| CC half | 0.962 | 0.981 | 0.592 |
| Anomalous completeness | 91.5 | 95.2 | 56.5 |
| Anomalous multiplicity | 2.6 | 2.6 | 2.6 |
| Cell | 69.129 | 90.129 | 114.682 | 107.074 | 105.632 | 95.954 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
