X-Ray Diffraction data from Catalase HPII from E. coli, source of 6BY0 structure

Data DOI: 10.15785/SBGRID/572 | ID: 572

6BY0 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Buschiazzo Laboratory, Institut Pasteur de Montevideo

Release Date: 30 Mar 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/572

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/572 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/572 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/572 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/572 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 572 ; shasum -c files.sha'

Storage requirements: 21G

Biological Sample:

Catalase HPII from E. coli

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

beamline I04, Diamond Light Source, UK

Data Creation Date:

11 Jul 2017

Related Datasets:

None


Cite this Dataset

Lisa, N; Trajtenberg, F; Buschiazzo, A. 2018. "X-Ray Diffraction data for: Catalase HPII from E. coli. PDB Code 6BY0", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/572.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Alejandro BuschiazzoDepositorLab of Mol & Structural Microbiology, Institut Pasteur de Montevideo
Natalia LisaLab of Mol & Structural Microbiology, Institut Pasteur de Montevideo
Felipe TrajtenbergData CollectorLab of Mol & Structural Microbiology, Institut Pasteur de Montevideo
Alejandro BuschiazzoPIInstitut Pasteur de Montevideo

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/572/III_D7_3_####.cbf

Images:

1 - 3600

Beam:

(209.1, 220.93) -> (209.1, 221.01)

Distance:

547.47 -> 546.0

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.75 7.46 2.75
Low resolution limit 48.79 48.8 2.8
Completeness 98.1 98.0 97.6
Multiplicity 5.1 5.1 5.3
I/sigma 4.3 12.7 1.0
Rmerge 0.243 0.077 0.951
CC half 0.957 0.991 0.608
Anomalous completeness 94.7 94.1 95.7
Anomalous multiplicity 2.6 2.6 2.6
Cell 69.17 90.18 114.79 107.07 105.71 95.88

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/572/III_D7_3_####.cbf

Images:

1 - 3600

Beam:

(209.1, 220.93) -> (209.1, 221.01)

Distance:

547.47 -> 548.49

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.28 6.19 2.28
Low resolution limit 65.32 65.35 2.32
Completeness 87.4 99.7 40.8
Multiplicity 4.9 5.0 4.2
I/sigma 2.9 5.1 1.2
Rmerge 0.24 0.119 0.665
CC half 0.97 0.984 0.518
Anomalous completeness 82.0 93.9 32.4
Anomalous multiplicity 2.5 2.5 2.5
Cell 69.132 90.132 114.685 107.074 105.632 95.955

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.