Data DOI: 10.15785/SBGRID/572 | ID: 572
6BY0 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Buschiazzo Laboratory, Institut Pasteur de Montevideo
Release Date: 30 Mar 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/572
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/572 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/572 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/572 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/572 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 572 ; shasum -c files.sha'
Storage requirements: 21G
Biological Sample:
Catalase HPII from E. coli
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
beamline I04, Diamond Light Source, UK
Data Creation Date:
11 Jul 2017
Related Datasets:
None
Lisa, N; Trajtenberg, F; Buschiazzo, A. 2018. "X-Ray Diffraction data for: Catalase HPII from E. coli. PDB Code 6BY0", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/572.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Alejandro Buschiazzo | Depositor | Lab of Mol & Structural Microbiology, Institut Pasteur de Montevideo |
| Natalia Lisa | Lab of Mol & Structural Microbiology, Institut Pasteur de Montevideo | |
| Felipe Trajtenberg | Data Collector | Lab of Mol & Structural Microbiology, Institut Pasteur de Montevideo |
| Alejandro Buschiazzo | PI | Institut Pasteur de Montevideo |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/572/III_D7_3_####.cbf
Images:
1 - 3600
Beam:
(209.1, 220.93) -> (209.1, 221.02)
Distance:
547.47 -> 546.08
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.41 | 6.54 | 2.41 |
| Low resolution limit | 49.25 | 49.26 | 2.45 |
| Completeness | 95.1 | 98.3 | 64.1 |
| Multiplicity | 5.0 | 5.1 | 4.3 |
| I/sigma | 3.3 | 10.6 | 0.4 |
| Rmerge | 0.293 | 0.093 | 1.416 |
| CC half | 0.96 | 0.989 | 0.317 |
| Anomalous completeness | 90.0 | 94.6 | 54.0 |
| Anomalous multiplicity | 2.6 | 2.6 | 2.6 |
| Cell | 69.16 | 90.17 | 114.78 | 107.07 | 105.71 | 95.88 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/572/III_D7_3_####.cbf
Images:
1 - 3600
Beam:
(209.1, 220.93) -> (209.1, 221.01)
Distance:
547.47 -> 548.23
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.12 | 5.75 | 2.12 |
| Low resolution limit | 80.06 | 80.11 | 2.16 |
| Completeness | 76.5 | 99.7 | 23.6 |
| Multiplicity | 5.0 | 5.2 | 3.9 |
| I/sigma | 6.6 | 19.4 | 0.7 |
| Rmerge | 0.237 | 0.1 | 1.821 |
| CC half | 0.975 | 0.975 | 0.335 |
| Anomalous completeness | 71.4 | 96.6 | 16.6 |
| Anomalous multiplicity | 2.6 | 2.6 | 2.6 |
| Cell | 69.172 | 90.185 | 114.752 | 107.068 | 105.635 | 95.955 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
