X-Ray Diffraction data from ICAP1 in complex with integrin beta 1 cytoplasmic tail, source of 4DX9 structure

Data DOI: 10.15785/SBGRID/550 | ID: 550

Publication DOI: 10.1016/j.molcel.2012.12.005

4DX9 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Boggon Laboratory, Yale University School of Medicine

Release Date: 23 Jan 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/550

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/550 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/550 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/550 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/550 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 550 ; shasum -c files.sha'

Storage requirements: 12G

Biological Sample:

ICAP1 in complex with integrin beta 1 cytoplasmic tail

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

NSLS X25

Data Creation Date:

2 Dec 2011

Related Datasets:

None


Cite this Dataset

Liu, W; Boggon, TJ. 2018. "X-Ray Diffraction data for: ICAP1 in complex with integrin beta 1 cytoplasmic tail. PDB Code 4DX9", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/550.

Download Citation

Dataset Description

Se SAD

Project Members

Name Additional Roles Affiliation While Working on the Project
Weizhi LiuData CollectorYale University School of Medicine
Titus J BoggonDepositor, PIYale University School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9755

Sweep:

SWEEP2

Files:

/programs/datagrid/550/red4p2-se-wz_2_####.img

Images:

721 - 1440

Beam:

(136.0, 135.2) -> (136.0, 135.17)

Distance:

350.0 -> 350.53

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.51 6.81 2.51
Low resolution limit 43.97 43.98 2.55
Completeness 99.6 99.5 96.4
Multiplicity 51.6 53.2 18.5
I/sigma 14.4 44.3 1.2
Rmerge 0.353 0.082 2.651
CC half 0.998 1.0 0.45
Anomalous completeness 99.6 99.0 96.7
Anomalous multiplicity 27.0 27.0 27.0
Cell 135.15 231.62 75.58 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9755

Sweep:

SWEEP2

Files:

/programs/datagrid/550/red4p2-se-wz_2_####.img

Images:

721 - 1440

Beam:

(136.0, 135.2) -> (136.0, 135.17)

Distance:

350.0 -> 352.53

Spacegroup:

C 2 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.54 6.88 2.54
Low resolution limit 49.58 49.59 2.58
Completeness 99.5 100.0 92.3
Multiplicity 52.2 54.6 18.3
I/sigma 20.0 65.7 2.7
Rmerge 0.234 0.057 0.916
CC half 0.999 1.0 0.526
Anomalous completeness 99.5 100.0 92.7
Anomalous multiplicity 27.3 27.3 27.3
Cell 76.114 232.785 136.181 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.