X-Ray Diffraction data from Thaumatococcus daniellii thaumatin, source of 6fj6 structure

Data DOI: 10.15785/SBGRID/544 | ID: 544

6fj6 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McCarthy Laboratory, EMBL - Grenoble

Release Date: Jan. 23, 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/544

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/544 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/544 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/544 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/544 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 544 ; shasum -c files.sha'

Storage requirements: 8.5G

Biological Sample:

Thaumatococcus daniellii thaumatin

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ID30B at the ESRF

Data Creation Date:

June 15, 2017

Related Datasets:

None


Cite this Dataset

McCarthy, AA. 2018. "X-Ray Diffraction data for: Thaumatococcus daniellii thaumatin. PDB Code 6fj6", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/544.

Download Citation

Dataset Description

Thaumatin dataset at 100K

Project Members

Name Additional Roles Affiliation While Working on the Project
Andrew A McCarthyData Collector, DepositorEMBL-Grenoble
Andrew McCarthyPIEMBL - Grenoble

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97872

Sweep:

SWEEP1

Files:

/programs/datagrid/544/Thau_x1_w1_1_####.cbf

Images:

1 - 1460

Beam:

(223.89, 210.65) -> (223.89, 211.22)

Distance:

194.21 -> 194.29

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.15 3.12 1.15
Low resolution limit 39.55 39.57 1.17
Completeness 99.3 99.2 96.8
Multiplicity 4.6 4.8 2.8
I/sigma 10.7 27.1 1.1
Rmerge 0.057 0.051 0.783
CC half 0.996 0.994 0.491
Anomalous completeness 91.9 93.1 76.0
Anomalous multiplicity 2.5 2.5 2.5
Cell 57.96 57.96 150.74 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97872

Sweep:

SWEEP1

Files:

/programs/datagrid/544/Thau_x1_w1_1_####.cbf

Images:

1 - 1460

Beam:

(223.89, 210.65) -> (223.89, 211.2)

Distance:

194.21 -> 194.44

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.16 3.15 1.16
Low resolution limit 39.55 39.57 1.18
Completeness 99.1 99.2 97.4
Multiplicity 4.7 4.8 3.1
I/sigma 10.9 27.1 1.1
Rmerge 0.057 0.051 0.819
CC half 0.996 0.993 0.448
Anomalous completeness 92.3 93.0 82.1
Anomalous multiplicity 2.5 2.5 2.5
Cell 57.96 57.96 150.75 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97872

Sweep:

SWEEP1

Files:

/programs/datagrid/544/Thau_x1_w1_1_####.cbf

Images:

1 - 1460

Beam:

(223.89, 210.65) -> (223.89, 211.2)

Distance:

194.21 -> 194.55

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.12 3.04 1.12
Low resolution limit 75.35 75.52 1.14
Completeness 99.0 99.8 87.4
Multiplicity 4.6 4.9 2.3
I/sigma 7.0 14.8 1.0
Rmerge 0.059 0.053 0.674
CC half 0.993 0.988 0.566
Anomalous completeness 93.1 94.5 57.3
Anomalous multiplicity 2.5 2.5 2.5
Cell 57.932 57.932 150.693 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.