Data DOI: 10.15785/SBGRID/543 | ID: 543
6fj4 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McCarthy Laboratory, EMBL - Grenoble
Release Date: Jan. 23, 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/543
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/543 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/543 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/543 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/543 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 543 ; shasum -c files.sha'
Storage requirements: 7.2G
Biological Sample:
Feruloyl esterase module of xylanase 10B from C. thermocellum
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ID30B at the ESRF
Data Creation Date:
April 5, 2017
Related Datasets:
None
McCarthy, AA. 2018. "X-Ray Diffraction data for: Feruloyl esterase module of xylanase 10B from C. thermocellum. PDB Code 6fj4", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/543.
Anomalous Se-Met peak dataset of Feruloyl esterase module of xylanase 10B from C. thermocellum for phasing
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Andrew A McCarthy | Data Collector, Depositor | EMBL-Grenoble |
| Andrew McCarthy | PI | EMBL - Grenoble |
Anomalous data ceollection
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/543/FAE_x1_w1_1_####.cbf
Images:
1 - 1240
Beam:
(217.18, 208.78) -> (217.18, 208.98)
Distance:
266.26 -> 264.89
Spacegroup:
P 4 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.6 | 4.34 | 1.6 |
| Low resolution limit | 55.57 | 55.6 | 1.63 |
| Completeness | 98.2 | 93.4 | 99.6 |
| Multiplicity | 4.1 | 4.1 | 4.0 |
| I/sigma | 10.4 | 28.9 | 1.6 |
| Rmerge | 0.058 | 0.041 | 0.671 |
| CC half | 0.996 | 0.992 | 0.272 |
| Anomalous completeness | 93.0 | 90.6 | 92.5 |
| Anomalous multiplicity | 2.2 | 2.2 | 2.2 |
| Cell | 111.134 | 111.134 | 65.317 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/543/FAE_x1_w1_1_####.cbf
Images:
1 - 1240
Beam:
(217.18, 208.78) -> (217.18, 208.87)
Distance:
266.26 -> 264.08
Spacegroup:
P 4 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.6 | 4.34 | 1.6 |
| Low resolution limit | 49.68 | 49.7 | 1.63 |
| Completeness | 98.6 | 93.5 | 99.4 |
| Multiplicity | 4.4 | 4.2 | 4.2 |
| I/sigma | 12.1 | 33.1 | 0.9 |
| Rmerge | 0.045 | 0.034 | 1.232 |
| CC half | 0.997 | 0.995 | 0.335 |
| Anomalous completeness | 94.4 | 89.6 | 94.7 |
| Anomalous multiplicity | 2.4 | 2.4 | 2.4 |
| Cell | 111.09 | 111.09 | 65.35 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/543/FAE_x1_w1_1_####.cbf
Images:
1 - 1240
Beam:
(217.18, 208.78) -> (217.18, 208.87)
Distance:
266.26 -> 264.62
Spacegroup:
P 4 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.6 | 4.34 | 1.6 |
| Low resolution limit | 55.55 | 55.58 | 1.63 |
| Completeness | 98.6 | 93.6 | 99.4 |
| Multiplicity | 4.4 | 4.2 | 4.2 |
| I/sigma | 12.1 | 33.0 | 0.9 |
| Rmerge | 0.045 | 0.034 | 1.236 |
| CC half | 0.998 | 0.995 | 0.33 |
| Anomalous completeness | 94.5 | 89.5 | 94.8 |
| Anomalous multiplicity | 2.4 | 2.4 | 2.4 |
| Cell | 111.1 | 111.1 | 65.35 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/543/FAE_x1_w1_1_####.cbf
Images:
1 - 1240
Beam:
(217.18, 208.78) -> (217.18, 208.87)
Distance:
266.26 -> 264.76
Spacegroup:
P 4 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.6 | 4.34 | 1.6 |
| Low resolution limit | 55.53 | 55.57 | 1.63 |
| Completeness | 98.6 | 94.2 | 99.3 |
| Multiplicity | 4.4 | 4.3 | 4.2 |
| I/sigma | 9.6 | 25.3 | 0.7 |
| Rmerge | 0.053 | 0.04 | 0.967 |
| CC half | 0.997 | 0.994 | 0.42 |
| Anomalous completeness | 95.3 | 92.4 | 94.2 |
| Anomalous multiplicity | 2.4 | 2.4 | 2.4 |
| Cell | 111.065 | 111.065 | 65.311 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
