X-Ray Diffraction data from Feruloyl esterase module of xylanase 10B from C. thermocellum, source of 6fj4 structure

Data DOI: 10.15785/SBGRID/543 | ID: 543

6fj4 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McCarthy Laboratory, EMBL - Grenoble

Release Date: Jan. 23, 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/543

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/543 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/543 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/543 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/543 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 543 ; shasum -c files.sha'

Storage requirements: 7.2G

Biological Sample:

Feruloyl esterase module of xylanase 10B from C. thermocellum

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ID30B at the ESRF

Data Creation Date:

April 5, 2017

Related Datasets:

None


Cite this Dataset

McCarthy, AA. 2018. "X-Ray Diffraction data for: Feruloyl esterase module of xylanase 10B from C. thermocellum. PDB Code 6fj4", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/543.

Download Citation

Dataset Description

Anomalous Se-Met peak dataset of Feruloyl esterase module of xylanase 10B from C. thermocellum for phasing

Project Members

Name Additional Roles Affiliation While Working on the Project
Andrew A McCarthyData Collector, DepositorEMBL-Grenoble
Andrew McCarthyPIEMBL - Grenoble

Reprocessing Instructions

Anomalous data ceollection

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/543/FAE_x1_w1_1_####.cbf

Images:

1 - 1240

Beam:

(217.18, 208.78) -> (217.18, 208.98)

Distance:

266.26 -> 264.89

Spacegroup:

P 4 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.6 4.34 1.6
Low resolution limit 55.57 55.6 1.63
Completeness 98.2 93.4 99.6
Multiplicity 4.1 4.1 4.0
I/sigma 10.4 28.9 1.6
Rmerge 0.058 0.041 0.671
CC half 0.996 0.992 0.272
Anomalous completeness 93.0 90.6 92.5
Anomalous multiplicity 2.2 2.2 2.2
Cell 111.134 111.134 65.317 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/543/FAE_x1_w1_1_####.cbf

Images:

1 - 1240

Beam:

(217.18, 208.78) -> (217.18, 208.87)

Distance:

266.26 -> 264.08

Spacegroup:

P 4 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.6 4.34 1.6
Low resolution limit 49.68 49.7 1.63
Completeness 98.6 93.5 99.4
Multiplicity 4.4 4.2 4.2
I/sigma 12.1 33.1 0.9
Rmerge 0.045 0.034 1.232
CC half 0.997 0.995 0.335
Anomalous completeness 94.4 89.6 94.7
Anomalous multiplicity 2.4 2.4 2.4
Cell 111.09 111.09 65.35 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/543/FAE_x1_w1_1_####.cbf

Images:

1 - 1240

Beam:

(217.18, 208.78) -> (217.18, 208.87)

Distance:

266.26 -> 264.62

Spacegroup:

P 4 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.6 4.34 1.6
Low resolution limit 55.55 55.58 1.63
Completeness 98.6 93.6 99.4
Multiplicity 4.4 4.2 4.2
I/sigma 12.1 33.0 0.9
Rmerge 0.045 0.034 1.236
CC half 0.998 0.995 0.33
Anomalous completeness 94.5 89.5 94.8
Anomalous multiplicity 2.4 2.4 2.4
Cell 111.1 111.1 65.35 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/543/FAE_x1_w1_1_####.cbf

Images:

1 - 1240

Beam:

(217.18, 208.78) -> (217.18, 208.87)

Distance:

266.26 -> 264.76

Spacegroup:

P 4 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.6 4.34 1.6
Low resolution limit 55.53 55.57 1.63
Completeness 98.6 94.2 99.3
Multiplicity 4.4 4.3 4.2
I/sigma 9.6 25.3 0.7
Rmerge 0.053 0.04 0.967
CC half 0.997 0.994 0.42
Anomalous completeness 95.3 92.4 94.2
Anomalous multiplicity 2.4 2.4 2.4
Cell 111.065 111.065 65.311 90.0 90.0 90.0

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License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.