X-Ray Diffraction data from Bovine trypsin, source of 6fid structure

Data DOI: 10.15785/SBGRID/541 | ID: 541

6fid Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McCarthy Laboratory, EMBL - Grenoble

Release Date: Jan. 23, 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/541

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/541 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/541 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/541 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/541 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 541 ; shasum -c files.sha'

Storage requirements: 42G

Biological Sample:

Bovine trypsin

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ID30B at the ESRF

Data Creation Date:

June 15, 2017

Related Datasets:

None


Cite this Dataset

McCarthy, AA. 2018. "X-Ray Diffraction data for: Bovine trypsin. PDB Code 6fid", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/541.

Download Citation

Dataset Description

S-SAD Trypsin data collected on ID30B in two orientations (random and C* aligned)

Project Members

Name Additional Roles Affiliation While Working on the Project
Andrew A McCarthyData Collector, DepositorEMBL-Grenoble
Andrew McCarthyPIEMBL - Grenoble

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 2.0664

Sweep:

SWEEP2

Files:

/programs/datagrid/541/Trypsin_x1_align_2_####.cbf

Images:

1 - 3600

Beam:

(223.7, 210.76) -> (223.7, 211.29)

Distance:

156.59 -> 156.51

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.98 5.38 1.98
Low resolution limit 43.87 43.88 2.02
Completeness 87.2 100.0 17.5
Multiplicity 18.8 21.5 2.1
I/sigma 27.0 44.7 2.7
Rmerge 0.089 0.089 0.246
CC half 0.998 0.998 0.561
Anomalous completeness 84.6 100.0 7.6
Anomalous multiplicity 10.2 10.2 10.2
Cell 60.07 64.23 69.85 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 2.0664

Sweep:

SWEEP2

Files:

/programs/datagrid/541/Trypsin_x1_align_2_####.cbf

Images:

1 - 3600

Beam:

(223.7, 210.76) -> (223.7, 211.28)

Distance:

156.59 -> 156.51

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.98 5.38 1.98
Low resolution limit 43.87 43.88 2.02
Completeness 87.1 100.0 17.5
Multiplicity 18.8 21.6 2.1
I/sigma 27.1 44.9 2.7
Rmerge 0.089 0.089 0.245
CC half 0.998 0.998 0.574
Anomalous completeness 84.7 100.0 7.4
Anomalous multiplicity 10.2 10.2 10.2
Cell 60.07 64.23 69.85 90.0 90.0 90.0

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.