Data DOI: 10.15785/SBGRID/541 | ID: 541
6fid Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McCarthy Laboratory, EMBL - Grenoble
Release Date: 23 Jan 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/541
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/541 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/541 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/541 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/541 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 541 ; shasum -c files.sha'
Storage requirements: 42G
Biological Sample:
Bovine trypsin
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ID30B at the ESRF
Data Creation Date:
15 Jun 2017
Related Datasets:
None
McCarthy, AA. 2018. "X-Ray Diffraction data for: Bovine trypsin. PDB Code 6fid", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/541.
S-SAD Trypsin data collected on ID30B in two orientations (random and C* aligned)
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Andrew A McCarthy | Data Collector, Depositor | EMBL-Grenoble |
| Andrew McCarthy | PI | EMBL - Grenoble |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 2.0664
Sweep:
SWEEP2
Files:
/programs/datagrid/541/Trypsin_x1_align_2_####.cbf
Images:
1 - 3600
Beam:
(223.7, 210.76) -> (223.7, 211.29)
Distance:
156.59 -> 156.51
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.98 | 5.38 | 1.98 |
| Low resolution limit | 43.87 | 43.88 | 2.02 |
| Completeness | 87.3 | 100.0 | 17.2 |
| Multiplicity | 19.4 | 21.6 | 2.1 |
| I/sigma | 28.4 | 44.0 | 3.2 |
| Rmerge | 0.091 | 0.089 | 0.206 |
| CC half | 0.998 | 0.997 | 0.582 |
| Anomalous completeness | 85.4 | 100.0 | 7.3 |
| Anomalous multiplicity | 10.4 | 10.4 | 10.4 |
| Cell | 60.07 | 64.23 | 69.85 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 2.0664
Sweep:
SWEEP2
Files:
/programs/datagrid/541/Trypsin_x1_align_2_####.cbf
Images:
1 - 3600
Beam:
(223.7, 210.76) -> (223.7, 211.27)
Distance:
156.59 -> 156.58
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.98 | 5.38 | 1.98 |
| Low resolution limit | 43.87 | 43.88 | 2.02 |
| Completeness | 87.2 | 100.0 | 17.2 |
| Multiplicity | 19.4 | 21.7 | 2.1 |
| I/sigma | 28.4 | 44.1 | 3.1 |
| Rmerge | 0.092 | 0.089 | 0.206 |
| CC half | 0.998 | 0.997 | 0.583 |
| Anomalous completeness | 85.4 | 100.0 | 7.3 |
| Anomalous multiplicity | 10.5 | 10.5 | 10.5 |
| Cell | 60.07 | 64.23 | 69.85 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 2.0664
Sweep:
SWEEP2
Files:
/programs/datagrid/541/Trypsin_x1_align_2_####.cbf
Images:
1 - 3600
Beam:
(223.7, 210.76) -> (223.7, 211.28)
Distance:
156.59 -> 156.57
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.98 | 5.38 | 1.98 |
| Low resolution limit | 47.28 | 47.29 | 2.02 |
| Completeness | 84.5 | 100.0 | 12.5 |
| Multiplicity | 11.6 | 12.8 | 3.1 |
| I/sigma | 19.4 | 36.4 | 0.4 |
| Rmerge | 0.121 | 0.102 | 0.399 |
| CC half | 0.991 | 0.994 | -0.195 |
| Anomalous completeness | 84.5 | 100.0 | 12.3 |
| Anomalous multiplicity | 5.9 | 5.9 | 5.9 |
| Cell | 60.126 | 64.225 | 69.848 | 90.0 | 89.949 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
