X-Ray Diffraction data from S. cerevisiae Zip2(499-704):Spo16 complex, source of 6BZF structure

Data DOI: 10.15785/SBGRID/538 | ID: 538

Publication DOI: 10.1101/258194

6BZF Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: 6 Feb 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/538

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/538 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/538 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/538 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/538 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 538 ; shasum -c files.sha'

Storage requirements: 3.2G

Biological Sample:

S. cerevisiae Zip2(499-704):Spo16 complex

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 24ID-E

Data Creation Date:

29 Oct 2016

Related Datasets:

None


Cite this Dataset

Arora, K; Corbett, KD. 2018. "X-Ray Diffraction data for: S. cerevisiae Zip2(499-704):Spo16 complex. PDB Code 6BZF", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/538.

Download Citation

Dataset Description

Native dataset, C2 crystal form

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorCorbett Lab
Kanika AroraData CollectorCorbett Lab
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97917

Sweep:

SWEEP1

Files:

/programs/datagrid/538/L9_1_###.img

Images:

1 - 180

Beam:

(149.11, 155.91) -> (149.11, 156.36)

Distance:

350.0 -> 350.6

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.29 6.22 2.29
Low resolution limit 84.78 84.84 2.33
Completeness 98.0 99.8 94.2
Multiplicity 3.4 3.6 2.8
I/sigma 8.6 18.7 1.6
Rmerge 0.081 0.035 0.605
CC half 0.994 0.998 0.58
Anomalous completeness 84.8 94.6 77.2
Anomalous multiplicity 1.9 1.9 1.9
Cell 169.569 63.656 199.23 90.0 90.588 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97917

Sweep:

SWEEP1

Files:

/programs/datagrid/538/L9_1_###.img

Images:

1 - 180

Beam:

(149.11, 155.91) -> (149.11, 156.28)

Distance:

350.0 -> 350.47

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.29 6.21 2.29
Low resolution limit 66.39 66.41 2.33
Completeness 98.6 94.8 99.5
Multiplicity 3.6 3.5 3.0
I/sigma 11.4 30.3 1.4
Rmerge 0.063 0.022 0.714
CC half 0.998 0.999 0.515
Anomalous completeness 80.2 80.8 77.0
Anomalous multiplicity 2.0 2.0 2.0
Cell 169.52 63.63 199.17 90.0 90.61 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97917

Sweep:

SWEEP1

Files:

/programs/datagrid/538/L9_1_###.img

Images:

1 - 180

Beam:

(149.11, 155.91) -> (149.11, 156.28)

Distance:

350.0 -> 350.27

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.29 6.21 2.29
Low resolution limit 66.39 66.41 2.33
Completeness 98.6 94.8 99.6
Multiplicity 3.6 3.5 3.0
I/sigma 11.4 30.3 1.4
Rmerge 0.063 0.022 0.714
CC half 0.998 0.999 0.51
Anomalous completeness 80.2 80.8 76.9
Anomalous multiplicity 2.0 2.0 2.0
Cell 169.52 63.63 199.17 90.0 90.61 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97917

Sweep:

SWEEP1

Files:

/programs/datagrid/538/L9_1_###.img

Images:

1 - 180

Beam:

(149.11, 155.91) -> (149.11, 156.27)

Distance:

350.0 -> 350.19

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.26 6.13 2.26
Low resolution limit 64.22 64.25 2.3
Completeness 99.9 99.9 98.7
Multiplicity 3.6 3.6 2.9
I/sigma 8.5 19.9 1.7
Rmerge 0.075 0.031 0.47
CC half 0.993 0.994 0.392
Anomalous completeness 84.9 94.5 76.8
Anomalous multiplicity 2.0 2.0 2.0
Cell 169.483 63.631 199.251 90.0 90.585 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.