Data DOI: 10.15785/SBGRID/538 | ID: 538
Publication DOI: 10.1101/258194
6BZF Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Corbett Laboratory, University of California, San Diego
Release Date: 6 Feb 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/538
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/538 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/538 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/538 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/538 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 538 ; shasum -c files.sha'
Storage requirements: 3.2G
Biological Sample:
S. cerevisiae Zip2(499-704):Spo16 complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24ID-E
Data Creation Date:
29 Oct 2016
Related Datasets:
None
Arora, K; Corbett, KD. 2018. "X-Ray Diffraction data for: S. cerevisiae Zip2(499-704):Spo16 complex. PDB Code 6BZF", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/538.
Native dataset, C2 crystal form
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin D Corbett | Depositor | Corbett Lab |
| Kanika Arora | Data Collector | Corbett Lab |
| Kevin Corbett | PI | University of California, San Diego |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97917
Sweep:
SWEEP1
Files:
/programs/datagrid/538/L9_1_###.img
Images:
1 - 180
Beam:
(149.11, 155.91) -> (149.11, 156.28)
Distance:
350.0 -> 350.48
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.18 | 5.92 | 2.18 |
| Low resolution limit | 66.38 | 66.41 | 2.22 |
| Completeness | 98.2 | 94.6 | 93.7 |
| Multiplicity | 3.4 | 3.5 | 2.4 |
| I/sigma | 10.1 | 30.1 | 0.8 |
| Rmerge | 0.069 | 0.021 | 0.985 |
| CC half | 0.998 | 0.999 | 0.366 |
| Anomalous completeness | 77.8 | 80.2 | 58.1 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 169.5 | 63.63 | 199.15 | 90.0 | 90.61 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97917
Sweep:
SWEEP1
Files:
/programs/datagrid/538/L9_1_###.img
Images:
1 - 180
Beam:
(149.11, 155.91) -> (149.11, 156.28)
Distance:
350.0 -> 350.32
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.18 | 5.92 | 2.18 |
| Low resolution limit | 66.38 | 66.41 | 2.22 |
| Completeness | 98.2 | 94.7 | 93.7 |
| Multiplicity | 3.4 | 3.5 | 2.4 |
| I/sigma | 10.1 | 30.1 | 0.8 |
| Rmerge | 0.069 | 0.022 | 0.986 |
| CC half | 0.998 | 0.999 | 0.365 |
| Anomalous completeness | 77.8 | 80.2 | 58.1 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 169.5 | 63.63 | 199.15 | 90.0 | 90.61 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97917
Sweep:
SWEEP1
Files:
/programs/datagrid/538/L9_1_###.img
Images:
1 - 180
Beam:
(149.11, 155.91) -> (149.11, 156.27)
Distance:
350.0 -> 350.0
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.21 | 6.0 | 2.21 |
| Low resolution limit | 199.17 | 199.99 | 2.25 |
| Completeness | 99.8 | 99.9 | 96.8 |
| Multiplicity | 3.6 | 3.7 | 2.7 |
| I/sigma | 11.2 | 44.1 | 1.1 |
| Rmerge | 0.131 | 0.041 | 0.964 |
| CC half | 0.947 | 0.996 | 0.008 |
| Anomalous completeness | 84.8 | 95.3 | 71.4 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 169.377 | 63.591 | 199.185 | 90.0 | 90.575 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
