X-Ray Diffraction data from 5C4 Fab, source of 5W24 structure

Data DOI: 10.15785/SBGRID/537 | ID: 537

Publication DOI: 10.1038/s41467-017-01858-w

5W24 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McLellan Laboratory, University of Texas at Austin

Release Date: 26 Dec 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/537

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/537 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/537 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/537 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/537 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 537 ; shasum -c files.sha'

Storage requirements: 3.0G

Biological Sample:

5C4 Fab

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

X6A at NSLS (Brookhaven, NY)

Data Creation Date:

25 Mar 2014

Related Datasets:

None


Cite this Dataset

Battles, MB; McLellan, JS. 2017. "X-Ray Diffraction data for: 5C4 Fab. PDB Code 5W24", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/537.

Download Citation

Dataset Description

Native

Project Members

Name Additional Roles Affiliation While Working on the Project
Michael B BattlesDepositorGeisel School of Medicine at Dartmouth
Jason S McLellanData CollectorGeisel School of Medicine at Dartmouth
Jason McLellanPIUniversity of Texas at Austin

Reprocessing Instructions

1) indexed and integrated to 1.5A as C2 2) molecular replacement solution obtained using a murine antibody heavy chain (PDB ID: 3T3P3) and light chain (PDB ID 4GAG)

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/537/5C4FabP2P12_22_###.img

Images:

1 - 360

Beam:

(135.2, 134.2) -> (135.2, 135.44)

Distance:

175.0 -> 174.95

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.35 3.66 1.35
Low resolution limit 26.3 26.3 1.37
Completeness 79.2 71.3 29.9
Multiplicity 3.6 3.3 3.1
I/sigma 10.9 22.7 1.1
Rmerge 0.043 0.02 0.876
CC half 0.998 0.998 0.642
Anomalous completeness 68.2 55.0 21.4
Anomalous multiplicity 2.0 2.0 2.0
Cell 56.61 63.05 117.05 90.0 98.58 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/537/5C4FabP2P12_22_###.img

Images:

1 - 360

Beam:

(135.2, 134.2) -> (135.2, 135.43)

Distance:

175.0 -> 174.58

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.35 3.66 1.35
Low resolution limit 55.37 55.41 1.37
Completeness 79.2 71.1 29.9
Multiplicity 3.6 3.3 3.1
I/sigma 10.9 22.6 1.0
Rmerge 0.043 0.02 0.882
CC half 0.998 0.998 0.641
Anomalous completeness 68.2 54.7 21.3
Anomalous multiplicity 2.0 2.0 2.0
Cell 56.61 63.05 117.05 90.0 98.58 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/537/5C4FabP2P12_22_###.img

Images:

1 - 360

Beam:

(135.2, 134.2) -> (135.2, 135.43)

Distance:

175.0 -> 174.81

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.41 3.84 1.41
Low resolution limit 30.12 30.12 1.44
Completeness 71.2 96.4 0.8
Multiplicity 3.3 3.6 1.0
I/sigma 17.4 30.4 1.2
Rmerge 0.03 0.025 0.0
CC half 0.998 0.997 0.0
Anomalous completeness 59.2 93.9 0.0
Anomalous multiplicity 1.8 1.8 1.8
Cell 117.144 63.111 56.653 90.0 98.586 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.