Data DOI: 10.15785/SBGRID/533 | ID: 533
5UPK Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Boggon Laboratory, Yale University School of Medicine
Release Date: Dec. 22, 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/533
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/533 .'
(Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/533 .'
(Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/533 .'
(Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/533 .'
(Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 533 ; shasum -c files.sha'
Storage requirements: 9.5G
Biological Sample:
PAK4cat-PAK4N45-CDC42
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24-ID-E
Data Creation Date:
Feb. 10, 2014
Related Datasets:
None
Ha, BHak; Boggon, TJ. 2017. "X-Ray Diffraction data for: PAK4cat-PAK4N45-CDC42. PDB Code 5UPK", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/533.
Diffaction images
Name | Additional Roles | Affiliation While Working on the Project |
---|---|---|
Titus J Boggon | Depositor | Yale University |
Byung Hak Ha | Data Collector | Yale University |
Titus Boggon | PI | Yale University School of Medicine |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP3
Files:
/programs/datagrid/533/TJB1BH-04-3_1_###.img
Images:
1 - 180
Beam:
(153.37, 158.89) -> (153.37, 158.97)
Distance:
300.0 -> 297.49
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
ALL | LOW | HIGH | |
---|---|---|---|
High resolution limit | 2.57 | 6.97 | 2.57 |
Low resolution limit | 61.26 | 61.28 | 2.61 |
Completeness | 99.7 | 99.4 | 93.9 |
Multiplicity | 5.5 | 5.5 | 5.6 |
I/sigma | 8.9 | 59.9 | 0.4 |
Rmerge | 0.15 | 0.059 | 1.637 |
CC half | 0.995 | 0.997 | 0.611 |
Anomalous completeness | 98.3 | 97.8 | 92.7 |
Anomalous multiplicity | 2.7 | 2.7 | 2.7 |
Cell | 58.259 | 61.301 | 85.445 | 89.997 | 88.58 | 90.046 |
---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.