Data DOI: 10.15785/SBGRID/532 | ID: 532
5UPL Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Boggon Laboratory, Yale University School of Medicine
Release Date: 22 Dec 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/532
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/532 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/532 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/532 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/532 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 532 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
PAK4FL-CDC42
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24-ID-E
Data Creation Date:
9 Dec 2013
Related Datasets:
None
Ha, BHak; Boggon, TJ. 2017. "X-Ray Diffraction data for: PAK4FL-CDC42. PDB Code 5UPL", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/532.
Diffaction images
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Titus J Boggon | Depositor | Yale University |
| Byung Hak Ha | Data Collector | Yale University |
| Titus Boggon | PI | Yale University School of Medicine |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97922
Sweep:
SWEEP2
Files:
/programs/datagrid/532/BH_TJB2P05_2_###.img
Images:
1 - 120
Beam:
(152.99, 158.81) -> (152.99, 158.94)
Distance:
350.0 -> 348.88
Spacegroup:
P 63
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.03 | 8.22 | 3.03 |
| Low resolution limit | 62.06 | 62.07 | 3.08 |
| Completeness | 100.0 | 98.7 | 100.0 |
| Multiplicity | 17.4 | 16.2 | 11.3 |
| I/sigma | 19.4 | 71.0 | 0.9 |
| Rmerge | 0.099 | 0.037 | 3.167 |
| CC half | 1.0 | 0.999 | 0.3 |
| Anomalous completeness | 99.9 | 98.2 | 100.0 |
| Anomalous multiplicity | 9.0 | 9.0 | 9.0 |
| Cell | 141.63 | 141.63 | 62.06 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97922
Sweep:
SWEEP2
Files:
/programs/datagrid/532/BH_TJB2P05_2_###.img
Images:
1 - 120
Beam:
(152.99, 158.81) -> (152.99, 158.94)
Distance:
350.0 -> 348.98
Spacegroup:
P 63
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.03 | 8.22 | 3.03 |
| Low resolution limit | 62.06 | 62.07 | 3.08 |
| Completeness | 100.0 | 98.7 | 100.0 |
| Multiplicity | 17.3 | 16.2 | 11.3 |
| I/sigma | 19.5 | 70.9 | 0.9 |
| Rmerge | 0.099 | 0.037 | 3.175 |
| CC half | 0.999 | 0.999 | 0.292 |
| Anomalous completeness | 99.9 | 98.2 | 100.0 |
| Anomalous multiplicity | 9.0 | 9.0 | 9.0 |
| Cell | 141.63 | 141.63 | 62.06 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97922
Sweep:
SWEEP2
Files:
/programs/datagrid/532/BH_TJB2P05_2_###.img
Images:
1 - 120
Beam:
(152.99, 158.81) -> (152.99, 158.93)
Distance:
350.0 -> 348.77
Spacegroup:
P 6
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.93 | 7.95 | 2.93 |
| Low resolution limit | 122.5 | 122.61 | 2.98 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 18.8 | 17.8 | 19.1 |
| I/sigma | 12.3 | 80.0 | 0.3 |
| Rmerge | 0.119 | 0.05 | 4.757 |
| CC half | 0.996 | 0.994 | 0.314 |
| Anomalous completeness | 99.9 | 100.0 | 99.6 |
| Anomalous multiplicity | 9.7 | 9.7 | 9.7 |
| Cell | 141.449 | 141.449 | 61.968 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
