X-Ray Diffraction data from PAK4FL-CDC42, source of 5UPL structure

Data DOI: 10.15785/SBGRID/532 | ID: 532

5UPL Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Boggon Laboratory, Yale University School of Medicine

Release Date: Dec. 22, 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/532

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/532 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/532 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/532 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/532 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 532 ; shasum -c files.sha'

Storage requirements: 5.3G

Biological Sample:

PAK4FL-CDC42

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 24-ID-E

Data Creation Date:

Dec. 9, 2013

Related Datasets:

None


Cite this Dataset

Ha, BHak; Boggon, TJ. 2017. "X-Ray Diffraction data for: PAK4FL-CDC42. PDB Code 5UPL", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/532.

Download Citation

Dataset Description

Diffaction images

Project Members

Name Additional Roles Affiliation While Working on the Project
Titus J BoggonDepositorYale University
Byung Hak HaData CollectorYale University
Titus BoggonPIYale University School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97922

Sweep:

SWEEP2

Files:

/programs/datagrid/532/BH_TJB2P05_2_###.img

Images:

1 - 120

Beam:

(152.99, 158.81) -> (152.99, 158.98)

Distance:

350.0 -> 349.45

Spacegroup:

P 63

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 4.72 12.78 4.72
Low resolution limit 62.09 62.09 4.8
Completeness 99.8 95.2 100.0
Multiplicity 15.8 15.4 10.8
I/sigma 29.6 41.1 19.6
Rmerge 0.062 0.048 0.088
CC half 0.999 0.999 0.997
Anomalous completeness 99.7 92.9 100.0
Anomalous multiplicity 8.3 8.3 8.3
Cell 141.705 141.705 62.087 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97922

Sweep:

SWEEP2

Files:

/programs/datagrid/532/BH_TJB2P05_2_###.img

Images:

1 - 120

Beam:

(152.99, 158.81) -> (152.99, 158.94)

Distance:

350.0 -> 348.58

Spacegroup:

P 63

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.08 8.36 3.08
Low resolution limit 122.66 122.76 3.13
Completeness 100.0 98.5 100.0
Multiplicity 13.1 16.2 11.5
I/sigma 19.7 71.2 1.2
Rmerge 0.076 0.036 2.754
CC half 0.999 0.999 0.389
Anomalous completeness 99.8 98.1 99.5
Anomalous multiplicity 6.8 6.8 6.8
Cell 141.64 141.64 62.06 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97922

Sweep:

SWEEP2

Files:

/programs/datagrid/532/BH_TJB2P05_2_###.img

Images:

1 - 120

Beam:

(152.99, 158.81) -> (152.99, 158.94)

Distance:

350.0 -> 349.05

Spacegroup:

P 63

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 4.53 12.29 4.53
Low resolution limit 122.66 122.71 4.61
Completeness 99.8 95.3 100.0
Multiplicity 14.9 14.6 10.9
I/sigma 42.2 68.1 23.6
Rmerge 0.044 0.038 0.08
CC half 1.0 0.999 0.999
Anomalous completeness 99.8 94.3 100.0
Anomalous multiplicity 7.9 7.9 7.9
Cell 141.64 141.64 62.06 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97922

Sweep:

SWEEP2

Files:

/programs/datagrid/532/BH_TJB2P05_2_###.img

Images:

1 - 120

Beam:

(152.99, 158.81) -> (152.99, 158.92)

Distance:

350.0 -> 348.78

Spacegroup:

P 63

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 4.76 12.88 4.76
Low resolution limit 61.99 61.99 4.84
Completeness 99.8 94.4 100.0
Multiplicity 15.9 15.7 11.1
I/sigma 35.5 50.6 25.5
Rmerge 0.051 0.049 0.077
CC half 1.0 0.999 0.997
Anomalous completeness 99.7 93.2 100.0
Anomalous multiplicity 8.4 8.4 8.4
Cell 141.474 141.474 61.989 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.