X-Ray Diffraction data from Human TorsinA-LULL1 complex, source of 5J1S structure

Data DOI: 10.15785/SBGRID/524 | ID: 524

Publication DOI: 10.7554/eLife.17983

5J1S Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Schwartz Laboratory, Massachusetts Institute of Technology

Release Date: Nov. 21, 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/524

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/524 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/524 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/524 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/524 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 524 ; shasum -c files.sha'

Storage requirements: 5.9G

Biological Sample:

Human TorsinA-LULL1 complex

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

beamline 24-ID-C, NE-CAT, APS, Chicago, IL

Data Creation Date:

March 29, 2016

Related Datasets:

None


Cite this Dataset

Demircioglu, FEsra; Schwartz, TU. 2017. "X-Ray Diffraction data for: Human TorsinA-LULL1 complex. PDB Code 5J1S", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/524.

Download Citation

Dataset Description

Native Data

Project Members

Name Additional Roles Affiliation While Working on the Project
Thomas U SchwartzDepositorMIT
F. Esra DemirciogluData CollectorMIT
Thomas SchwartzPIMassachusetts Institute of Technology

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9778

Sweep:

SWEEP1

Files:

/programs/datagrid/524/ED158_F_6_1_####.cbf

Images:

1 - 1000

Beam:

(217.01, 220.78) -> (217.01, 220.91)

Distance:

250.0 -> 250.4

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.43 3.88 1.43
Low resolution limit 61.24 61.3 1.45
Completeness 99.5 99.1 98.9
Multiplicity 6.3 6.4 6.5
I/sigma 5.9 14.7 1.1
Rmerge 0.115 0.079 1.375
CC half 0.994 0.992 0.702
Anomalous completeness 98.2 98.7 97.7
Anomalous multiplicity 3.3 3.3 3.3
Cell 104.97 75.408 89.867 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9778

Sweep:

SWEEP1

Files:

/programs/datagrid/524/ED158_F_6_1_####.cbf

Images:

1 - 1000

Beam:

(217.01, 220.78) -> (217.01, 220.79)

Distance:

250.0 -> 250.05

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.4 3.8 1.4
Low resolution limit 52.51 52.55 1.42
Completeness 99.8 99.7 99.5
Multiplicity 7.0 6.5 7.2
I/sigma 12.3 34.1 1.0
Rmerge 0.06 0.038 2.125
CC half 0.999 0.998 0.598
Anomalous completeness 98.6 97.8 98.4
Anomalous multiplicity 3.6 3.6 3.6
Cell 75.42 89.71 105.02 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9778

Sweep:

SWEEP1

Files:

/programs/datagrid/524/ED158_F_6_1_####.cbf

Images:

1 - 1000

Beam:

(217.01, 220.78) -> (217.01, 220.78)

Distance:

250.0 -> 250.44

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.4 3.8 1.4
Low resolution limit 61.26 61.32 1.42
Completeness 99.7 99.7 99.5
Multiplicity 7.0 6.5 7.2
I/sigma 12.3 34.0 1.0
Rmerge 0.06 0.038 2.132
CC half 0.999 0.998 0.592
Anomalous completeness 98.6 97.8 98.4
Anomalous multiplicity 3.6 3.6 3.6
Cell 75.42 89.71 105.02 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9778

Sweep:

SWEEP1

Files:

/programs/datagrid/524/ED158_F_6_1_####.cbf

Images:

1 - 1000

Beam:

(217.01, 220.78) -> (217.01, 220.78)

Distance:

250.0 -> 250.44

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.46 3.96 1.46
Low resolution limit 89.67 89.84 1.49
Completeness 99.9 99.9 98.8
Multiplicity 7.0 6.7 7.1
I/sigma 8.9 28.3 1.0
Rmerge 0.083 0.053 0.976
CC half 0.997 0.996 0.867
Anomalous completeness 99.5 99.6 98.3
Anomalous multiplicity 3.6 3.6 3.6
Cell 75.384 89.669 104.995 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.