Data DOI: 10.15785/SBGRID/510 | ID: 510
Iverson Laboratory, Vanderbilt University
Release Date: 4 Jan 2022
1. If this dataset is locally available, it should be accessable at /programs/datagrid/510
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/510 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/510 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/510 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/510 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 510 ; shasum -c files.sha'
Storage requirements: 2.2G
Biological Sample:
SK678BR
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
SSRL 9-2
Data Creation Date:
3 Feb 2017
Related Datasets:
None
Yamakawa, I; Iverson, T. 2022. "X-Ray Diffraction data for: SK678BR.", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/510.
X-ray diffraction images of the binding region of SK678.
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Izumi Yamakawa | Data Collector, Depositor | Vanderbilt University |
| Tina Iverson | PI | Vanderbilt University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/510/empty_4_#####.cbf
Images:
1 - 360
Beam:
(217.32, 211.82) -> (217.32, 211.87)
Distance:
350.0 -> 349.43
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.62 | 4.4 | 1.62 |
| Low resolution limit | 41.77 | 41.78 | 1.65 |
| Completeness | 80.1 | 87.5 | 38.3 |
| Multiplicity | 3.8 | 3.6 | 3.7 |
| I/sigma | 9.4 | 28.9 | 0.8 |
| Rmerge | 0.083 | 0.028 | 1.207 |
| CC half | 0.997 | 0.997 | 0.339 |
| Anomalous completeness | 74.5 | 73.3 | 35.6 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 59.59 | 59.65 | 61.86 | 90.06 | 100.76 | 90.03 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/510/empty_4_#####.cbf
Images:
1 - 360
Beam:
(217.32, 211.82) -> (217.32, 211.86)
Distance:
350.0 -> 349.4
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.62 | 4.4 | 1.62 |
| Low resolution limit | 41.77 | 41.78 | 1.65 |
| Completeness | 80.1 | 87.6 | 38.3 |
| Multiplicity | 3.8 | 3.6 | 3.7 |
| I/sigma | 9.4 | 28.9 | 0.8 |
| Rmerge | 0.083 | 0.028 | 1.213 |
| CC half | 0.997 | 0.997 | 0.327 |
| Anomalous completeness | 74.5 | 73.3 | 35.6 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 59.59 | 59.65 | 61.86 | 90.06 | 100.76 | 90.03 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/510/empty_4_#####.cbf
Images:
1 - 360
Beam:
(217.32, 211.82) -> (217.32, 211.85)
Distance:
350.0 -> 349.73
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.52 | 4.13 | 1.52 |
| Low resolution limit | 46.81 | 46.83 | 1.55 |
| Completeness | 79.7 | 97.2 | 29.7 |
| Multiplicity | 6.8 | 6.9 | 5.0 |
| I/sigma | 4.9 | 24.5 | 0.2 |
| Rmerge | 0.116 | 0.056 | 1.789 |
| CC half | 0.997 | 0.998 | 0.287 |
| Anomalous completeness | 79.1 | 97.6 | 28.4 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 59.67 | 59.729 | 61.93 | 90.0 | 100.775 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.