X-Ray Diffraction data from Robo1 Ig5, source of 5O51 structure

Data DOI: 10.15785/SBGRID/505 | ID: 505

Publication DOI: 10.1016/j.str.2017.12.003

5O51 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McCarthy Laboratory, EMBL - Grenoble

Release Date: Jan. 23, 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/505

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/505 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/505 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/505 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/505 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 505 ; shasum -c files.sha'

Storage requirements: 1.8G

Biological Sample:

Robo1 Ig5

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ID14-4 at the ESRF

Data Creation Date:

Sept. 9, 2011

Related Datasets:

None


Cite this Dataset

McCarthy, AA.. 2018. "X-Ray Diffraction data for: Robo1 Ig5. PDB Code 5O51", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/505.

Download Citation

Dataset Description

Robo1 Ig5 domain

Project Members

Name Additional Roles Affiliation While Working on the Project
Andrew A. McCarthyData Collector, DepositorEMBL-Grenoble
Andrew McCarthyPIEMBL - Grenoble

Reprocessing Instructions

I used all the data for structure solution and refinement

Processing Bundle

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9393

Sweep:

SWEEP1

Files:

/programs/datagrid/505/Test_x4_3_####.img

Images:

1 - 100

Beam:

(158.95, 161.03) -> (158.95, 161.11)

Distance:

419.14 -> 420.1

Spacegroup:

P 6

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.87 7.68 2.87
Low resolution limit 21.32 21.32 2.92
Completeness 99.7 98.6 100.0
Multiplicity 5.9 5.4 5.9
I/sigma 6.5 20.2 0.6
Rmerge 0.336 0.065 3.218
CC half 0.973 0.996 0.251
Anomalous completeness 96.8 96.8 95.7
Anomalous multiplicity 3.2 3.2 3.2
Cell 80.94 80.94 26.87 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9393

Sweep:

SWEEP1

Files:

/programs/datagrid/505/Test_x4_3_####.img

Images:

1 - 100

Beam:

(158.95, 161.03) -> (158.95, 161.13)

Distance:

419.14 -> 420.5

Spacegroup:

P 6

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.75 7.45 2.75
Low resolution limit 40.47 40.47 2.8
Completeness 99.7 98.1 100.0
Multiplicity 5.9 5.3 6.1
I/sigma 5.9 19.8 0.6
Rmerge 0.365 0.065 2.862
CC half 0.974 0.995 0.048
Anomalous completeness 96.9 94.3 99.1
Anomalous multiplicity 3.2 3.2 3.2
Cell 80.93 80.93 26.87 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9393

Sweep:

SWEEP1

Files:

/programs/datagrid/505/Test_x4_3_####.img

Images:

1 - 100

Beam:

(158.95, 161.03) -> (158.95, 161.1)

Distance:

419.14 -> 420.95

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.2 8.66 3.2
Low resolution limit 40.83 40.84 3.25
Completeness 69.2 62.7 74.2
Multiplicity 2.9 2.9 2.9
I/sigma 6.3 33.5 0.6
Rmerge 0.197 0.045 1.402
CC half 0.849 0.982 -0.014
Anomalous completeness 60.6 56.7 66.4
Anomalous multiplicity 1.7 1.7 1.7
Cell 81.243 26.992 81.445 90.0 119.735 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.