Data DOI: 10.15785/SBGRID/505 | ID: 505
Publication DOI: 10.1016/j.str.2017.12.003
5O51 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McCarthy Laboratory, EMBL - Grenoble
Release Date: 23 Jan 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/505
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/505 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/505 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/505 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/505 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 505 ; shasum -c files.sha'
Storage requirements: 1.8G
Biological Sample:
Robo1 Ig5
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ID14-4 at the ESRF
Data Creation Date:
9 Sep 2011
Related Datasets:
None
McCarthy, AA.. 2018. "X-Ray Diffraction data for: Robo1 Ig5. PDB Code 5O51", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/505.
Robo1 Ig5 domain
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Andrew A. McCarthy | Data Collector, Depositor | EMBL-Grenoble |
| Andrew McCarthy | PI | EMBL - Grenoble |
I used all the data for structure solution and refinement
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9393
Sweep:
SWEEP1
Files:
/programs/datagrid/505/Test_x4_3_####.img
Images:
1 - 100
Beam:
(158.95, 161.03) -> (158.95, 161.11)
Distance:
419.14 -> 420.1
Spacegroup:
P 6
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.87 | 7.68 | 2.87 |
| Low resolution limit | 21.32 | 21.32 | 2.92 |
| Completeness | 99.7 | 98.6 | 100.0 |
| Multiplicity | 5.9 | 5.4 | 5.9 |
| I/sigma | 6.5 | 20.2 | 0.6 |
| Rmerge | 0.336 | 0.065 | 3.218 |
| CC half | 0.973 | 0.996 | 0.251 |
| Anomalous completeness | 96.8 | 96.8 | 95.7 |
| Anomalous multiplicity | 3.2 | 3.2 | 3.2 |
| Cell | 80.94 | 80.94 | 26.87 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9393
Sweep:
SWEEP1
Files:
/programs/datagrid/505/Test_x4_3_####.img
Images:
1 - 100
Beam:
(158.95, 161.03) -> (158.95, 161.13)
Distance:
419.14 -> 420.5
Spacegroup:
P 6
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.75 | 7.45 | 2.75 |
| Low resolution limit | 40.47 | 40.47 | 2.8 |
| Completeness | 99.7 | 98.1 | 100.0 |
| Multiplicity | 5.9 | 5.3 | 6.1 |
| I/sigma | 5.9 | 19.8 | 0.6 |
| Rmerge | 0.365 | 0.065 | 2.862 |
| CC half | 0.974 | 0.995 | 0.048 |
| Anomalous completeness | 96.9 | 94.3 | 99.1 |
| Anomalous multiplicity | 3.2 | 3.2 | 3.2 |
| Cell | 80.93 | 80.93 | 26.87 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9393
Sweep:
SWEEP1
Files:
/programs/datagrid/505/Test_x4_3_####.img
Images:
1 - 100
Beam:
(158.95, 161.03) -> (158.95, 161.1)
Distance:
419.14 -> 420.95
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.2 | 8.66 | 3.2 |
| Low resolution limit | 40.83 | 40.84 | 3.25 |
| Completeness | 69.2 | 62.7 | 74.2 |
| Multiplicity | 2.9 | 2.9 | 2.9 |
| I/sigma | 6.3 | 33.5 | 0.6 |
| Rmerge | 0.197 | 0.045 | 1.402 |
| CC half | 0.849 | 0.982 | -0.014 |
| Anomalous completeness | 60.6 | 56.7 | 66.4 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 81.243 | 26.992 | 81.445 | 90.0 | 119.735 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
