Data DOI: 10.15785/SBGRID/504 | ID: 504
Publication DOI: 10.1016/j.str.2017.12.003
5OPE Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McCarthy Laboratory, EMBL - Grenoble
Release Date: 23 Jan 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/504
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/504 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/504 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/504 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/504 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 504 ; shasum -c files.sha'
Storage requirements: 6.4G
Biological Sample:
Robo1 Ig1-4 Crystal 2
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ID14-4 at the ESRF
Data Creation Date:
13 Sep 2007
Related Datasets:
None
McCarthy, AA.. 2018. "X-Ray Diffraction data for: Robo1 Ig1-4 Crystal 2. PDB Code 5OPE", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/504.
Robo1 Ig1-4 Crystal form 2
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Andrew A. McCarthy | Data Collector, Depositor | EMBL-Grenoble |
| Andrew McCarthy | PI | EMBL - Grenoble |
Only used the first 180 images for structure solution and refinement
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9395
Sweep:
SWEEP1
Files:
/programs/datagrid/504/x96lite11-30gl-2_2_###.img
Images:
1 - 360
Beam:
(158.06, 156.7) -> (158.06, 156.72)
Distance:
427.48 -> 425.45
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.39 | 6.48 | 2.39 |
| Low resolution limit | 41.3 | 41.3 | 2.43 |
| Completeness | 96.5 | 100.0 | 74.9 |
| Multiplicity | 6.4 | 6.4 | 3.9 |
| I/sigma | 2.7 | 5.2 | 0.4 |
| Rmerge | 0.28 | 0.109 | 3.104 |
| CC half | 0.986 | 0.992 | 0.374 |
| Anomalous completeness | 92.8 | 99.5 | 61.1 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 43.74 | 99.59 | 250.57 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9395
Sweep:
SWEEP1
Files:
/programs/datagrid/504/x96lite11-30gl-2_2_###.img
Images:
1 - 360
Beam:
(158.06, 156.7) -> (158.06, 156.73)
Distance:
427.48 -> 428.65
Spacegroup:
C 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.29 | 6.21 | 2.29 |
| Low resolution limit | 40.06 | 40.06 | 2.33 |
| Completeness | 92.5 | 99.7 | 57.8 |
| Multiplicity | 6.2 | 6.3 | 3.5 |
| I/sigma | 4.8 | 10.4 | 0.5 |
| Rmerge | 0.206 | 0.104 | 2.007 |
| CC half | 0.986 | 0.989 | 0.371 |
| Anomalous completeness | 87.4 | 99.0 | 42.4 |
| Anomalous multiplicity | 3.4 | 3.4 | 3.4 |
| Cell | 43.75 | 99.6 | 250.64 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9395
Sweep:
SWEEP1
Files:
/programs/datagrid/504/x96lite11-30gl-2_2_###.img
Images:
1 - 360
Beam:
(158.06, 156.7) -> (158.06, 156.73)
Distance:
427.48 -> 426.87
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.17 | 5.88 | 2.17 |
| Low resolution limit | 248.26 | 249.9 | 2.2 |
| Completeness | 86.5 | 100.0 | 38.9 |
| Multiplicity | 6.2 | 6.5 | 3.5 |
| I/sigma | 2.9 | 10.7 | 0.1 |
| Rmerge | 0.326 | 0.144 | 5.28 |
| CC half | 0.933 | 0.977 | 0.073 |
| Anomalous completeness | 81.8 | 99.9 | 30.0 |
| Anomalous multiplicity | 3.4 | 3.4 | 3.4 |
| Cell | 43.585 | 99.22 | 248.259 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
