X-Ray Diffraction data from Robo1 Ig1-4 Crystal 1, source of 5O5G structure

Data DOI: 10.15785/SBGRID/503 | ID: 503

Publication DOI: 10.1016/j.str.2017.12.003

5O5G Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McCarthy Laboratory, EMBL - Grenoble

Release Date: Jan. 23, 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/503

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/503 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/503 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/503 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/503 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 503 ; shasum -c files.sha'

Storage requirements: 3.2G

Biological Sample:

Robo1 Ig1-4 Crystal 1

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ID14-4 at the ESRF

Data Creation Date:

Sept. 12, 2007

Related Datasets:

None


Cite this Dataset

McCarthy, AA.. 2018. "X-Ray Diffraction data for: Robo1 Ig1-4 Crystal 1. PDB Code 5O5G", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/503.

Download Citation

Dataset Description

Robo1 Ig1-4 diffraction data collected on an ADSC Q315r detector

Project Members

Name Additional Roles Affiliation While Working on the Project
Andrew A. McCarthyData Collector, DepositorEMBL-Grenoble
Andrew McCarthyPIEMBL - Grenoble

Reprocessing Instructions

Only used the first 100 images for refinement

Processing Bundle

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9395

Sweep:

SWEEP1

Files:

/programs/datagrid/503/X96-6P400CApH4-2_4_###.img

Images:

1 - 180

Beam:

(158.07, 156.7) -> (158.07, 156.75)

Distance:

462.28 -> 462.34

Spacegroup:

C 2 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.85 7.74 2.85
Low resolution limit 118.72 118.82 2.9
Completeness 86.2 100.0 85.9
Multiplicity 6.3 5.6 5.8
I/sigma 4.8 9.1 1.0
Rmerge 0.304 0.113 1.428
CC half 0.961 0.984 0.364
Anomalous completeness 85.0 98.1 85.0
Anomalous multiplicity 3.4 3.4 3.4
Cell 43.783 99.38 237.439 90.0 90.0 90.0

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9395

Sweep:

SWEEP1

Files:

/programs/datagrid/503/X96-6P400CApH4-2_4_###.img

Images:

1 - 180

Beam:

(158.07, 156.7) -> (158.07, 156.73)

Distance:

462.28 -> 454.67

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.85 7.75 2.85
Low resolution limit 117.21 117.31 2.9
Completeness 98.8 100.0 87.3
Multiplicity 3.8 3.6 3.8
I/sigma 3.7 6.4 1.0
Rmerge 0.199 0.1 0.808
CC half 0.967 0.974 0.863
Anomalous completeness 89.9 98.3 76.4
Anomalous multiplicity 2.0 2.0 2.0
Cell 43.313 234.416 53.358 90.0 113.678 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.