X-Ray Diffraction data from Robo1 Ig1-4 Crystal 1, source of 5O5G structure

Data DOI: 10.15785/SBGRID/503 | ID: 503

Publication DOI: 10.1016/j.str.2017.12.003

5O5G Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McCarthy Laboratory, EMBL - Grenoble

Release Date: 23 Jan 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/503

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/503 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/503 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/503 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/503 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 503 ; shasum -c files.sha'

Storage requirements: 3.2G

Biological Sample:

Robo1 Ig1-4 Crystal 1

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ID14-4 at the ESRF

Data Creation Date:

12 Sep 2007

Related Datasets:

None


Cite this Dataset

McCarthy, AA.. 2018. "X-Ray Diffraction data for: Robo1 Ig1-4 Crystal 1. PDB Code 5O5G", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/503.

Download Citation

Dataset Description

Robo1 Ig1-4 diffraction data collected on an ADSC Q315r detector

Project Members

Name Additional Roles Affiliation While Working on the Project
Andrew A. McCarthyData Collector, DepositorEMBL-Grenoble
Andrew McCarthyPIEMBL - Grenoble

Reprocessing Instructions

Only used the first 100 images for refinement

Processing Bundle

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9395

Sweep:

SWEEP1

Files:

/programs/datagrid/503/X96-6P400CApH4-2_4_###.img

Images:

1 - 180

Beam:

(158.07, 156.7) -> (158.07, 156.76)

Distance:

462.28 -> 462.56

Spacegroup:

C 2 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.89 7.83 2.89
Low resolution limit 42.23 42.24 2.94
Completeness 100.0 100.0 100.0
Multiplicity 6.9 5.9 7.1
I/sigma 6.4 14.6 0.9
Rmerge 0.208 0.078 2.074
CC half 0.99 0.994 0.699
Anomalous completeness 99.2 97.8 99.8
Anomalous multiplicity 3.8 3.8 3.8
Cell 44.15 99.67 238.67 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9395

Sweep:

SWEEP1

Files:

/programs/datagrid/503/X96-6P400CApH4-2_4_###.img

Images:

1 - 180

Beam:

(158.07, 156.7) -> (158.07, 156.73)

Distance:

462.28 -> 462.89

Spacegroup:

C 2 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.93 7.94 2.93
Low resolution limit 46.27 46.28 2.98
Completeness 99.8 98.3 100.0
Multiplicity 6.8 5.9 7.0
I/sigma 3.5 6.7 0.7
Rmerge 0.344 0.169 2.049
CC half 0.945 0.961 0.535
Anomalous completeness 99.3 98.0 99.6
Anomalous multiplicity 3.7 3.7 3.7
Cell 44.32 100.04 243.69 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9395

Sweep:

SWEEP1

Files:

/programs/datagrid/503/X96-6P400CApH4-2_4_###.img

Images:

1 - 180

Beam:

(158.07, 156.7) -> (158.07, 156.73)

Distance:

462.28 -> 469.93

Spacegroup:

C 2 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.71 7.35 2.71
Low resolution limit 240.86 241.82 2.75
Completeness 98.9 100.0 86.5
Multiplicity 6.9 6.3 4.7
I/sigma 3.0 15.7 0.1
Rmerge 0.255 0.108 1.742
CC half 0.977 0.983 0.269
Anomalous completeness 98.4 100.0 84.6
Anomalous multiplicity 3.7 3.7 3.7
Cell 44.499 100.38 240.857 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.