Data DOI: 10.15785/SBGRID/494 | ID: 494
Publication DOI: 10.1016/j.bbapap.2017.10.004
5VEF Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Boggon Laboratory, Yale University School of Medicine
Release Date: 13 Oct 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/494
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/494 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/494 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/494 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/494 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 494 ; shasum -c files.sha'
Storage requirements: 6.4G
Biological Sample:
PAK4
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24-ID-E
Data Creation Date:
4 Nov 2015
Related Datasets:
None
Ha, BHak; Zhang, EY; Boggon, TJ. 2017. "X-Ray Diffraction data for: PAK4. PDB Code 5VEF", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/494.
2 180 degree sweeps
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Titus J Boggon | Data Collector, Depositor | Yale University |
| Byung Hak Ha | Data Collector | Yale University |
| Eric Y Zhang | Data Collector | Yale University |
| Titus Boggon | PI | Yale University School of Medicine |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97922
Sweep:
SWEEP2
Files:
/programs/datagrid/494/TJB7EZP9HAqp_1_###.img
Images:
1 - 180
Beam:
(151.61, 158.98) -> (151.61, 159.06)
Distance:
220.0 -> 220.15
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.7 | 4.61 | 1.7 |
| Low resolution limit | 91.51 | 91.65 | 1.73 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 18.6 | 23.0 | 14.2 |
| I/sigma | 14.2 | 47.5 | 0.9 |
| Rmerge | 0.196 | 0.06 | 2.954 |
| CC half | 0.999 | 0.999 | 0.341 |
| Anomalous completeness | 99.9 | 100.0 | 100.0 |
| Anomalous multiplicity | 10.0 | 10.0 | 10.0 |
| Cell | 62.11 | 62.11 | 183.03 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97922
Sweep:
SWEEP2
Files:
/programs/datagrid/494/TJB7EZP9HAqp_1_###.img
Images:
1 - 180
Beam:
(151.61, 158.98) -> (151.61, 159.06)
Distance:
220.0 -> 220.04
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.7 | 4.61 | 1.7 |
| Low resolution limit | 61.01 | 61.05 | 1.73 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 18.6 | 23.1 | 14.2 |
| I/sigma | 14.2 | 47.1 | 0.9 |
| Rmerge | 0.198 | 0.06 | 2.963 |
| CC half | 0.999 | 0.999 | 0.354 |
| Anomalous completeness | 99.9 | 100.0 | 100.0 |
| Anomalous multiplicity | 10.0 | 10.0 | 10.0 |
| Cell | 62.11 | 62.11 | 183.04 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
