X-Ray Diffraction data from RSV F B9320 Bound to MEDI8897, source of 5UDD structure

Data DOI: 10.15785/SBGRID/489 | ID: 489

Publication DOI: 10.1126/scitranslmed.aaj1928

5UDD Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McLellan Laboratory, University of Texas at Austin

Release Date: 22 Aug 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/489

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/489 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/489 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/489 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/489 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 489 ; shasum -c files.sha'

Storage requirements: 4.3G

Biological Sample:

RSV F B9320 Bound to MEDI8897

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

19-ID, SBC, APS, Chicago, IL

Data Creation Date:

10 Nov 2014

Related Datasets:

None


Cite this Dataset

McLellan, JS. 2017. "X-Ray Diffraction data for: RSV F B9320 Bound to MEDI8897. PDB Code 5UDD", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/489.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Jason S McLellanData Collector, DepositorGeisel School of Medicine at Dartmouth
Jason McLellanPIUniversity of Texas at Austin

Reprocessing Instructions

Beam center, as defined in the header, needs to be corrected to X=153.1 Y=162.6 Processing with iMosflm will require "Reverse direction of spindle rotation" to be checked

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97924

Sweep:

SWEEP1

Files:

/programs/datagrid/489/P6P8_9320_8897_X2.####.img

Images:

1 - 240

Beam:

(154.5, 159.98) -> (154.5, 162.57)

Distance:

546.55 -> 546.61

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 4.02 10.88 4.02
Low resolution limit 54.43 54.43 4.09
Completeness 100.0 100.0 100.0
Multiplicity 7.5 6.9 7.7
I/sigma 3.7 15.0 0.8
Rmerge 0.547 0.07 2.816
CC half 0.983 0.999 0.299
Anomalous completeness 99.8 99.0 99.9
Anomalous multiplicity 3.9 3.9 3.9
Cell 229.5 229.5 343.24 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97924

Sweep:

SWEEP1

Files:

/programs/datagrid/489/P6P8_9320_8897_X2.####.img

Images:

1 - 240

Beam:

(154.5, 159.98) -> (154.5, 159.53)

Distance:

546.55 -> 539.19

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 8.37 22.23 8.37
Low resolution limit 55.3 55.3 8.51
Completeness 35.1 45.0 3.3
Multiplicity 1.3 1.3 1.4
I/sigma 0.2 0.3 0.1
Rmerge 0.0 0.0 0.0
CC half 0.224 0.413 -0.359
Anomalous completeness 9.2 11.5 1.3
Anomalous multiplicity 1.0 1.0 1.0
Cell 183.904 184.179 184.913 81.896 82.234 81.982

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.