Data DOI: 10.15785/SBGRID/489 | ID: 489
Publication DOI: 10.1126/scitranslmed.aaj1928
5UDD Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McLellan Laboratory, University of Texas at Austin
Release Date: 22 Aug 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/489
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/489 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/489 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/489 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/489 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 489 ; shasum -c files.sha'
Storage requirements: 4.3G
Biological Sample:
RSV F B9320 Bound to MEDI8897
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
19-ID, SBC, APS, Chicago, IL
Data Creation Date:
10 Nov 2014
Related Datasets:
None
McLellan, JS. 2017. "X-Ray Diffraction data for: RSV F B9320 Bound to MEDI8897. PDB Code 5UDD", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/489.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Jason S McLellan | Data Collector, Depositor | Geisel School of Medicine at Dartmouth |
| Jason McLellan | PI | University of Texas at Austin |
Beam center, as defined in the header, needs to be corrected to X=153.1 Y=162.6 Processing with iMosflm will require "Reverse direction of spindle rotation" to be checked
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97924
Sweep:
SWEEP1
Files:
/programs/datagrid/489/P6P8_9320_8897_X2.####.img
Images:
1 - 240
Beam:
(154.5, 159.98) -> (154.5, 162.57)
Distance:
546.55 -> 546.61
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 4.02 | 10.88 | 4.02 |
| Low resolution limit | 54.43 | 54.43 | 4.09 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 7.5 | 6.9 | 7.7 |
| I/sigma | 3.7 | 15.0 | 0.8 |
| Rmerge | 0.547 | 0.07 | 2.816 |
| CC half | 0.983 | 0.999 | 0.299 |
| Anomalous completeness | 99.8 | 99.0 | 99.9 |
| Anomalous multiplicity | 3.9 | 3.9 | 3.9 |
| Cell | 229.5 | 229.5 | 343.24 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97924
Sweep:
SWEEP1
Files:
/programs/datagrid/489/P6P8_9320_8897_X2.####.img
Images:
1 - 240
Beam:
(154.5, 159.98) -> (154.5, 159.53)
Distance:
546.55 -> 539.19
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 8.37 | 22.23 | 8.37 |
| Low resolution limit | 55.3 | 55.3 | 8.51 |
| Completeness | 35.1 | 45.0 | 3.3 |
| Multiplicity | 1.3 | 1.3 | 1.4 |
| I/sigma | 0.2 | 0.3 | 0.1 |
| Rmerge | 0.0 | 0.0 | 0.0 |
| CC half | 0.224 | 0.413 | -0.359 |
| Anomalous completeness | 9.2 | 11.5 | 1.3 |
| Anomalous multiplicity | 1.0 | 1.0 | 1.0 |
| Cell | 183.904 | 184.179 | 184.913 | 81.896 | 82.234 | 81.982 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
