Data DOI: 10.15785/SBGRID/488 | ID: 488
Publication DOI: 10.1126/scitranslmed.aaj1928
5UDC Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McLellan Laboratory, University of Texas at Austin
Release Date: 22 Aug 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/488
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/488 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/488 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/488 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/488 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 488 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
Crystal Structure of RSV F A2 Bound to MEDI8897
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
19-ID, SBC, APS, Chicago, IL
Data Creation Date:
19 Jul 2014
Related Datasets:
None
McLellan, JS. 2017. "X-Ray Diffraction data for: Crystal Structure of RSV F A2 Bound to MEDI8897. PDB Code 5UDC", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/488.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Jason S McLellan | Data Collector, Depositor | Geisel School of Medicine at Dartmouth |
| Jason McLellan | PI | University of Texas at Austin |
Beam center, as defined in the header, needs to be corrected to X=153.1 Y=162.5. Processing with iMosflm will require "Reverse direction of spindle rotation" to be checked
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/488/F_MEDI_X1_P4P8.####.img
Images:
2 - 300
Beam:
(154.5, 159.98) -> (154.5, 162.52)
Distance:
400.1 -> 399.9
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 4.47 | 12.04 | 4.47 |
| Low resolution limit | 42.2 | 42.2 | 4.55 |
| Completeness | 97.5 | 89.6 | 99.3 |
| Multiplicity | 3.1 | 2.9 | 3.2 |
| I/sigma | 21.4 | 36.7 | 13.5 |
| Rmerge | 0.028 | 0.02 | 0.057 |
| CC half | 0.998 | 0.995 | 0.994 |
| Anomalous completeness | 87.1 | 77.0 | 91.8 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 103.88 | 126.6 | 162.43 | 90.0 | 102.65 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/488/F_MEDI_X1_P4P8.####.img
Images:
2 - 300
Beam:
(154.5, 159.98) -> (154.5, 162.52)
Distance:
400.1 -> 400.05
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.19 | 8.65 | 3.19 |
| Low resolution limit | 53.69 | 53.7 | 3.25 |
| Completeness | 98.3 | 91.7 | 98.7 |
| Multiplicity | 3.1 | 3.0 | 3.2 |
| I/sigma | 10.2 | 34.9 | 0.6 |
| Rmerge | 0.058 | 0.019 | 1.478 |
| CC half | 0.998 | 0.997 | 0.289 |
| Anomalous completeness | 89.6 | 80.9 | 90.9 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 103.88 | 126.61 | 162.43 | 90.0 | 102.65 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/488/F_MEDI_X1_P4P8.####.img
Images:
2 - 300
Beam:
(154.5, 159.98) -> (154.5, 162.52)
Distance:
400.1 -> 399.96
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.62 | 9.81 | 3.62 |
| Low resolution limit | 56.65 | 56.66 | 3.68 |
| Completeness | 98.8 | 97.6 | 94.9 |
| Multiplicity | 3.2 | 3.1 | 3.2 |
| I/sigma | 3.8 | 5.6 | 1.9 |
| Rmerge | 0.194 | 0.192 | 0.424 |
| CC half | 0.888 | 0.85 | 0.477 |
| Anomalous completeness | 93.3 | 93.9 | 88.8 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 103.794 | 126.493 | 162.281 | 90.0 | 102.64 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
