Data DOI: 10.15785/SBGRID/488 | ID: 488
Publication DOI: 10.1126/scitranslmed.aaj1928
5UDC Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McLellan Laboratory, University of Texas at Austin
Release Date: 22 Aug 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/488
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/488 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/488 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/488 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/488 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 488 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
Crystal Structure of RSV F A2 Bound to MEDI8897
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
19-ID, SBC, APS, Chicago, IL
Data Creation Date:
19 Jul 2014
Related Datasets:
None
McLellan, JS. 2017. "X-Ray Diffraction data for: Crystal Structure of RSV F A2 Bound to MEDI8897. PDB Code 5UDC", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/488.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Jason S McLellan | Data Collector, Depositor | Geisel School of Medicine at Dartmouth |
| Jason McLellan | PI | University of Texas at Austin |
Beam center, as defined in the header, needs to be corrected to X=153.1 Y=162.5. Processing with iMosflm will require "Reverse direction of spindle rotation" to be checked
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/488/F_MEDI_X1_P4P8.####.img
Images:
2 - 300
Beam:
(154.5, 159.98) -> (154.5, 162.52)
Distance:
400.1 -> 399.68
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.18 | 8.61 | 3.18 |
| Low resolution limit | 42.24 | 42.24 | 3.23 |
| Completeness | 98.8 | 93.9 | 99.8 |
| Multiplicity | 3.1 | 3.0 | 3.2 |
| I/sigma | 10.2 | 35.4 | 0.7 |
| Rmerge | 0.058 | 0.019 | 1.302 |
| CC half | 0.997 | 0.996 | 0.37 |
| Anomalous completeness | 89.9 | 82.2 | 91.9 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 103.89 | 126.61 | 162.44 | 90.0 | 102.65 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/488/F_MEDI_X1_P4P8.####.img
Images:
2 - 300
Beam:
(154.5, 159.98) -> (154.5, 162.51)
Distance:
400.1 -> 400.11
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.05 | 8.27 | 3.05 |
| Low resolution limit | 56.7 | 56.71 | 3.1 |
| Completeness | 98.9 | 94.2 | 99.6 |
| Multiplicity | 3.1 | 3.0 | 3.2 |
| I/sigma | 9.0 | 34.9 | 0.3 |
| Rmerge | 0.065 | 0.019 | 2.818 |
| CC half | 0.997 | 0.996 | 0.135 |
| Anomalous completeness | 90.1 | 82.3 | 91.0 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 103.89 | 126.61 | 162.44 | 90.0 | 102.65 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/488/F_MEDI_X1_P4P8.####.img
Images:
2 - 300
Beam:
(154.5, 159.98) -> (154.5, 162.52)
Distance:
400.1 -> 399.61
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.1 | 8.4 | 3.1 |
| Low resolution limit | 58.73 | 58.74 | 3.15 |
| Completeness | 99.4 | 97.9 | 99.3 |
| Multiplicity | 3.2 | 3.2 | 3.2 |
| I/sigma | 11.4 | 81.5 | 0.2 |
| Rmerge | 0.081 | 0.049 | 1.838 |
| CC half | 0.969 | 0.941 | 0.256 |
| Anomalous completeness | 94.3 | 96.5 | 93.2 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 103.75 | 126.488 | 162.208 | 90.0 | 102.636 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
