Data DOI: 10.15785/SBGRID/484 | ID: 484
Publication DOI: 10.1074/jbc.RA118.001803
5OOG Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 9 Mar 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/484
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/484 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/484 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/484 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/484 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 484 ; shasum -c files.sha'
Storage requirements: 2.5G
Biological Sample:
Human biliverdin IX beta reductase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
ESRF ID23EH1
Data Creation Date:
14 Apr 2010
Related Datasets:
Manso, JA.; Pereira, PJ.B.. 2018. "X-Ray Diffraction data for: Human biliverdin IX beta reductase. PDB Code 5OOG", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/484.
X-Ray Diffraction data from human biliverdin IX beta reductase - phloxine B complex, source of 5OOG structure - low resolution pass
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro J.B. Pereira | Data Collector, Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Jose A. Manso | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9762
Sweep:
SWEEP1
Files:
/programs/datagrid/484/ac7456_1_###.img
Images:
1 - 140
Beam:
(159.07, 159.14) -> (159.07, 159.1)
Distance:
356.81 -> 356.55
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.77 | 4.81 | 1.77 |
| Low resolution limit | 36.41 | 36.42 | 1.8 |
| Completeness | 75.3 | 97.4 | 7.4 |
| Multiplicity | 4.3 | 5.1 | 1.1 |
| I/sigma | 24.9 | 41.1 | 1.8 |
| Rmerge | 0.039 | 0.026 | 1.308 |
| CC half | 0.998 | 0.999 | 0.374 |
| Anomalous completeness | 65.8 | 94.1 | 0.6 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 107.6 | 40.26 | 49.46 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9762
Sweep:
SWEEP1
Files:
/programs/datagrid/484/ac7456_1_###.img
Images:
1 - 140
Beam:
(159.07, 159.14) -> (159.07, 159.1)
Distance:
356.81 -> 356.5
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.77 | 4.81 | 1.77 |
| Low resolution limit | 44.94 | 44.95 | 1.8 |
| Completeness | 75.3 | 97.5 | 7.4 |
| Multiplicity | 4.3 | 5.1 | 1.1 |
| I/sigma | 24.9 | 41.0 | 1.8 |
| Rmerge | 0.039 | 0.027 | 1.304 |
| CC half | 0.998 | 0.999 | 0.377 |
| Anomalous completeness | 65.9 | 94.2 | 0.6 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 107.6 | 40.26 | 49.46 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9762
Sweep:
SWEEP1
Files:
/programs/datagrid/484/ac7456_1_###.img
Images:
1 - 140
Beam:
(159.07, 159.14) -> (159.07, 159.08)
Distance:
356.81 -> 356.11
Spacegroup:
P 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.96 | 5.32 | 1.96 |
| Low resolution limit | 107.5 | 107.66 | 1.99 |
| Completeness | 83.8 | 91.7 | 39.4 |
| Multiplicity | 2.7 | 3.0 | 1.6 |
| I/sigma | 36.4 | 63.3 | 18.0 |
| Rmerge | 0.055 | 0.049 | 0.119 |
| CC half | 0.948 | 0.975 | 0.141 |
| Anomalous completeness | 70.7 | 86.7 | 22.0 |
| Anomalous multiplicity | 1.5 | 1.5 | 1.5 |
| Cell | 49.434 | 40.22 | 107.501 | 90.0 | 89.988 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
