Data DOI: 10.15785/SBGRID/482 | ID: 482
Publication DOI: 10.1107/S2052252519005372
5ONZ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 3 May 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/482
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/482 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/482 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/482 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/482 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 482 ; shasum -c files.sha'
Storage requirements: 7.4G
Biological Sample:
Mycobacterial glucosylglycerate hydrolase - D182A mutant in complex with glucosylglycolate
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
ESRF ID23-2
Data Creation Date:
24 Jul 2016
Related Datasets:
None
Cereija, TB.; Pereira, PJ.B.. 2019. "X-Ray Diffraction data for: Mycobacterial glucosylglycerate hydrolase - D182A mutant in complex with glucosylglycolate. PDB Code 5ONZ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/482.
X-Ray Diffraction data from M. hassiacum GgH, source of 5ONZ structure
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro J.B. Pereira | Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Tatiana B. Cereija | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.8729
Sweep:
SWEEP1
Files:
/programs/datagrid/482/bh3539_w1_1_####.cbf
Images:
1 - 3200
Beam:
(140.15, 138.87) -> (140.15, 138.7)
Distance:
200.89 -> 200.47
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.93 | 5.23 | 1.93 |
| Low resolution limit | 28.26 | 28.26 | 1.96 |
| Completeness | 95.2 | 92.2 | 95.7 |
| Multiplicity | 1.7 | 1.8 | 1.7 |
| I/sigma | 3.0 | 5.9 | 0.8 |
| Rmerge | 0.163 | 0.109 | 0.715 |
| CC half | 0.961 | 0.944 | 0.291 |
| Anomalous completeness | 58.4 | 71.9 | 58.6 |
| Anomalous multiplicity | 1.0 | 1.0 | 1.0 |
| Cell | 86.27 | 88.06 | 90.878 | 118.941 | 90.09 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.8729
Sweep:
SWEEP1
Files:
/programs/datagrid/482/bh3539_w1_1_####.cbf
Images:
1 - 3200
Beam:
(140.15, 138.87) -> (140.15, 138.71)
Distance:
200.89 -> 201.02
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.82 | 4.94 | 1.82 |
| Low resolution limit | 87.97 | 88.07 | 1.85 |
| Completeness | 99.9 | 99.9 | 100.0 |
| Multiplicity | 6.0 | 5.7 | 5.7 |
| I/sigma | 7.0 | 18.9 | 0.6 |
| Rmerge | 0.112 | 0.062 | 1.839 |
| CC half | 0.994 | 0.992 | 0.363 |
| Anomalous completeness | 98.6 | 98.0 | 99.1 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 158.93 | 86.23 | 87.97 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.8729
Sweep:
SWEEP1
Files:
/programs/datagrid/482/bh3539_w1_1_####.cbf
Images:
1 - 3200
Beam:
(140.15, 138.87) -> (140.15, 138.71)
Distance:
200.89 -> 201.12
Spacegroup:
P 21 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.73 | 4.69 | 1.73 |
| Low resolution limit | 87.97 | 88.09 | 1.76 |
| Completeness | 99.9 | 100.0 | 97.2 |
| Multiplicity | 6.0 | 5.8 | 6.1 |
| I/sigma | 6.3 | 31.8 | 0.2 |
| Rmerge | 0.12 | 0.061 | 2.26 |
| CC half | 0.988 | 0.968 | 0.333 |
| Anomalous completeness | 99.4 | 100.0 | 97.0 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 86.203 | 87.971 | 158.932 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
