X-Ray Diffraction data from Mycobacterial glucosylglycerate hydrolase - D43A mutant, source of 5OIV structure

Data DOI: 10.15785/SBGRID/471 | ID: 471

Publication DOI: 10.1107/S2052252519005372

5OIV Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Pereira Laboratory, IBMC/i3S, Universidade do Porto

Release Date: May 3, 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/471

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/471 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/471 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/471 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/471 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 471 ; shasum -c files.sha'

Storage requirements: 5.1G

Biological Sample:

Mycobacterial glucosylglycerate hydrolase - D43A mutant

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ESRF ID30A1

Data Creation Date:

Dec. 12, 2015

Related Datasets:

None


Cite this Dataset

Cereija, TB.; Pereira, PJ.B.. 2019. "X-Ray Diffraction data for: Mycobacterial glucosylglycerate hydrolase - D43A mutant. PDB Code 5OIV", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/471.

Download Citation

Dataset Description

X-Ray Diffraction data from M. hassiacum GgH, source of 5OIV structure

Project Members

Name Additional Roles Affiliation While Working on the Project
Pedro J.B. PereiraDepositorIBMC - Instituto de Biologia Molecular e Celular
Tatiana B. CereijaData CollectorIBMC - Instituto de Biologia Molecular e Celular
Pedro PereiraPIUniversidade do Porto

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.966

Sweep:

SWEEP1

Files:

/programs/datagrid/471/GGH01-GGH35_1_####.cbf

Images:

1 - 2180

Beam:

(146.86, 128.94) -> (146.86, 129.09)

Distance:

207.14 -> 206.9

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.71 4.64 1.71
Low resolution limit 59.08 59.12 1.74
Completeness 98.7 99.6 90.5
Multiplicity 3.7 3.7 2.9
I/sigma 9.9 25.5 1.3
Rmerge 0.059 0.037 0.827
CC half 0.994 0.984 0.355
Anomalous completeness 89.6 92.8 71.2
Anomalous multiplicity 2.0 2.0 2.0
Cell 159.239 85.96 88.144 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.966

Sweep:

SWEEP1

Files:

/programs/datagrid/471/GGH01-GGH35_1_####.cbf

Images:

1 - 2180

Beam:

(146.86, 128.94) -> (146.86, 128.98)

Distance:

207.14 -> 206.18

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.69 4.59 1.69
Low resolution limit 61.53 61.57 1.72
Completeness 99.4 98.6 98.7
Multiplicity 4.0 3.7 4.0
I/sigma 11.1 27.7 1.1
Rmerge 0.049 0.033 1.106
CC half 0.998 0.997 0.397
Anomalous completeness 93.0 90.9 93.1
Anomalous multiplicity 2.1 2.1 2.1
Cell 159.12 85.94 88.14 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.966

Sweep:

SWEEP1

Files:

/programs/datagrid/471/GGH01-GGH35_1_####.cbf

Images:

1 - 2180

Beam:

(146.86, 128.94) -> (146.86, 128.98)

Distance:

207.14 -> 206.32

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.69 4.59 1.69
Low resolution limit 77.1 77.18 1.72
Completeness 99.4 98.5 98.7
Multiplicity 4.0 3.7 4.0
I/sigma 11.1 27.7 1.1
Rmerge 0.049 0.032 1.106
CC half 0.998 0.997 0.4
Anomalous completeness 93.0 90.7 93.1
Anomalous multiplicity 2.1 2.1 2.1
Cell 159.12 85.94 88.14 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.966

Sweep:

SWEEP1

Files:

/programs/datagrid/471/GGH01-GGH35_1_####.cbf

Images:

1 - 2180

Beam:

(146.86, 128.94) -> (146.86, 128.98)

Distance:

207.14 -> 206.7

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.68 4.56 1.68
Low resolution limit 79.61 79.69 1.71
Completeness 99.4 99.7 94.7
Multiplicity 4.0 3.8 3.9
I/sigma 10.5 26.5 1.1
Rmerge 0.054 0.037 0.914
CC half 0.998 0.995 0.499
Anomalous completeness 93.9 95.1 88.1
Anomalous multiplicity 2.1 2.1 2.1
Cell 159.211 85.987 88.121 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.