Data DOI: 10.15785/SBGRID/464 | ID: 464
Publication DOI: 10.1107/S2052252519005372
5OHC Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: May 3, 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/464
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/464 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/464 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/464 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/464 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 464 ; shasum -c files.sha'
Storage requirements: 2.4G
Biological Sample:
Mycobacterial glucosylglycerate hydrolase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ESRF ID30A3
Data Creation Date:
Oct. 29, 2016
Related Datasets:
None
Cereija, TB.; Pereira, PJ.B.. 2019. "X-Ray Diffraction data for: Mycobacterial glucosylglycerate hydrolase. PDB Code 5OHC", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/464.
X-Ray Diffraction data from M. hassiacum GgH, source of 5OHC structure
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro J.B. Pereira | Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Tatiana B. Cereija | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9677
Sweep:
SWEEP1
Files:
/programs/datagrid/464/bm1013_w1_1_1_master.h5
Images:
1 - 1200
Beam:
(81.26, 76.55) -> (81.26, 76.61)
Distance:
126.48 -> 125.92
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.97 | 5.34 | 1.97 |
| Low resolution limit | 30.65 | 30.65 | 2.0 |
| Completeness | 99.4 | 98.8 | 99.7 |
| Multiplicity | 4.6 | 4.5 | 4.8 |
| I/sigma | 11.5 | 37.1 | 0.9 |
| Rmerge | 0.07 | 0.023 | 1.411 |
| CC half | 0.998 | 0.999 | 0.46 |
| Anomalous completeness | 93.6 | 95.7 | 96.0 |
| Anomalous multiplicity | 2.4 | 2.4 | 2.4 |
| Cell | 159.08 | 85.73 | 91.19 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9677
Sweep:
SWEEP1
Files:
/programs/datagrid/464/bm1013_w1_1_1_master.h5
Images:
1 - 1200
Beam:
(81.26, 76.55) -> (81.26, 76.61)
Distance:
126.48 -> 126.2
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.02 | 5.48 | 2.02 |
| Low resolution limit | 40.42 | 40.43 | 2.05 |
| Completeness | 99.4 | 98.8 | 99.7 |
| Multiplicity | 4.5 | 4.4 | 4.8 |
| I/sigma | 12.3 | 37.4 | 1.3 |
| Rmerge | 0.066 | 0.023 | 1.064 |
| CC half | 0.998 | 0.999 | 0.556 |
| Anomalous completeness | 93.4 | 95.7 | 95.5 |
| Anomalous multiplicity | 2.4 | 2.4 | 2.4 |
| Cell | 159.08 | 85.73 | 91.18 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9677
Sweep:
SWEEP1
Files:
/programs/datagrid/464/bm1013_w1_1_1_master.h5
Images:
1 - 1200
Beam:
(81.26, 76.55) -> (81.26, 76.61)
Distance:
126.48 -> 126.28
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.93 | 5.22 | 1.93 |
| Low resolution limit | 40.32 | 40.33 | 1.96 |
| Completeness | 99.2 | 98.9 | 91.5 |
| Multiplicity | 4.6 | 4.6 | 4.7 |
| I/sigma | 8.2 | 21.5 | 0.9 |
| Rmerge | 0.084 | 0.036 | 1.259 |
| CC half | 0.997 | 0.998 | 0.53 |
| Anomalous completeness | 94.9 | 98.5 | 88.1 |
| Anomalous multiplicity | 2.4 | 2.4 | 2.4 |
| Cell | 158.963 | 85.73 | 91.381 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
