Data DOI: 10.15785/SBGRID/456 | ID: 456
Publication DOI: 10.1016/j.jmb.2016.05.007
5C66 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Herschlag Laboratory, Stanford University
Release Date: 7 Jul 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/456
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/456 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/456 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/456 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/456 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 456 ; shasum -c files.sha'
Storage requirements: 2.1G
Biological Sample:
E. Coli Alkaline Phosphatase in complex with tungstate
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
SSRL, BL12-2
Data Creation Date:
7 Feb 2013
Related Datasets:
None
Peck, A; Ressl, S; Herschlag, D. 2017. "X-Ray Diffraction data for: E. Coli Alkaline Phosphatase in complex with tungstate. PDB Code 5C66", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/456.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Ariana Peck | Depositor | Data Depositor |
| Susanne Ressl | Data Collector | Data Collector |
| Daniel Herschlag | PI | Stanford University |
Data have successfully been processed using MOSFLM and XDS.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9795
Sweep:
SWEEP1
Files:
/programs/datagrid/456/I3_1_#####.cbf
Images:
1 - 357
Beam:
(217.32, 211.82) -> (217.32, 211.73)
Distance:
400.0 -> 399.85
Spacegroup:
P 63 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.77 | 4.8 | 1.77 |
| Low resolution limit | 49.35 | 49.37 | 1.8 |
| Completeness | 90.5 | 90.6 | 76.7 |
| Multiplicity | 5.7 | 6.0 | 2.8 |
| I/sigma | 15.8 | 62.5 | 0.3 |
| Rmerge | 0.042 | 0.014 | 2.215 |
| CC half | 1.0 | 1.0 | 0.301 |
| Anomalous completeness | 82.3 | 82.8 | 62.2 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 161.21 | 161.21 | 139.46 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9795
Sweep:
SWEEP1
Files:
/programs/datagrid/456/I3_1_#####.cbf
Images:
1 - 357
Beam:
(217.32, 211.82) -> (217.32, 211.73)
Distance:
400.0 -> 399.16
Spacegroup:
P 63 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.77 | 4.8 | 1.77 |
| Low resolution limit | 52.74 | 52.76 | 1.8 |
| Completeness | 90.5 | 90.6 | 76.7 |
| Multiplicity | 5.7 | 6.0 | 2.8 |
| I/sigma | 16.2 | 64.0 | 0.3 |
| Rmerge | 0.041 | 0.014 | 2.168 |
| CC half | 1.0 | 1.0 | 0.32 |
| Anomalous completeness | 82.3 | 82.8 | 62.0 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 161.21 | 161.21 | 139.47 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9795
Sweep:
SWEEP1
Files:
/programs/datagrid/456/I3_1_#####.cbf
Images:
1 - 357
Beam:
(217.32, 211.82) -> (217.32, 211.73)
Distance:
400.0 -> 399.77
Spacegroup:
P 63 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.69 | 4.59 | 1.69 |
| Low resolution limit | 62.41 | 62.46 | 1.72 |
| Completeness | 88.3 | 91.2 | 69.5 |
| Multiplicity | 5.3 | 6.1 | 2.1 |
| I/sigma | 12.7 | 74.0 | 0.1 |
| Rmerge | 0.049 | 0.022 | 2.88 |
| CC half | 0.999 | 0.997 | 0.314 |
| Anomalous completeness | 78.7 | 84.5 | 43.6 |
| Anomalous multiplicity | 2.9 | 2.9 | 2.9 |
| Cell | 161.169 | 161.169 | 139.502 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
