X-Ray Diffraction data from p190RhoGAP pseudoGTPase domain, source of 5U4U structure

Data DOI: 10.15785/SBGRID/454 | ID: 454

Publication DOI: 10.1038/s41467-017-00483-x

5U4U Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Boggon Laboratory, Yale University School of Medicine

Release Date: Sept. 12, 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/454

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/454 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/454 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/454 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/454 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 454 ; shasum -c files.sha'

Storage requirements: 5.0G

Biological Sample:

p190RhoGAP pseudoGTPase domain

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

NECAT-E

Data Creation Date:

April 6, 2015

Related Datasets:

None


Cite this Dataset

Stiegler, AL; Boggon, TJ. 2017. "X-Ray Diffraction data for: p190RhoGAP pseudoGTPase domain. PDB Code 5U4U", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/454.

Download Citation

Dataset Description

Native datasets

Project Members

Name Additional Roles Affiliation While Working on the Project
Titus J BoggonData Collector, DepositorYale University
Amy L StieglerData CollectorYale University
Titus BoggonPIYale University School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97915

Sweep:

SWEEP3

Files:

/programs/datagrid/454/TJB6_als_P14_3_1_###.img

Images:

1 - 57

Beam:

(152.57, 158.59) -> (152.57, 158.64)

Distance:

200.0 -> 198.77

Spacegroup:

P 61 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.05 5.56 2.05
Low resolution limit 54.52 54.54 2.09
Completeness 100.0 100.0 99.8
Multiplicity 31.1 25.0 26.9
I/sigma 11.4 28.9 1.5
Rmerge 0.429 0.092 6.239
CC half 0.994 0.995 0.437
Anomalous completeness 100.0 100.0 100.0
Anomalous multiplicity 17.5 17.5 17.5
Cell 62.96 62.96 160.56 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97915

Sweep:

SWEEP3

Files:

/programs/datagrid/454/TJB6_als_P14_3_1_###.img

Images:

1 - 57

Beam:

(152.57, 158.59) -> (152.57, 158.64)

Distance:

200.0 -> 199.42

Spacegroup:

P 61 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.06 5.59 2.06
Low resolution limit 53.52 53.53 2.1
Completeness 100.0 100.0 99.8
Multiplicity 31.1 24.9 26.0
I/sigma 11.6 29.1 1.8
Rmerge 0.427 0.09 5.287
CC half 0.995 0.997 0.535
Anomalous completeness 100.0 100.0 99.8
Anomalous multiplicity 17.5 17.5 17.5
Cell 62.95 62.95 160.55 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97915

Sweep:

SWEEP3

Files:

/programs/datagrid/454/TJB6_als_P14_3_1_###.img

Images:

1 - 57

Beam:

(152.57, 158.59) -> (152.57, 158.62)

Distance:

200.0 -> 198.26

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.6 7.05 2.6
Low resolution limit 53.28 53.29 2.64
Completeness 95.6 99.6 33.2
Multiplicity 2.8 3.0 3.3
I/sigma 7.3 31.5 0.8
Rmerge 0.187 0.05 1.705
CC half 0.973 0.993 0.015
Anomalous completeness 82.7 98.1 27.9
Anomalous multiplicity 1.5 1.5 1.5
Cell 62.253 62.245 158.348 89.84 89.849 120.452

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.