Data DOI: 10.15785/SBGRID/453 | ID: 453
Publication DOI: 10.1038/ncomms15091
5TSH Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Howell Laboratory, University of Toronto
Release Date: 13 Jun 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/453
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/453 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/453 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/453 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/453 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 453 ; shasum -c files.sha'
Storage requirements: 24G
Biological Sample:
PilB from Geobacter metallireducens bound to AMP-PNP
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
08ID-1, CLS, SK, CANADA
Data Creation Date:
28 Jul 2016
Related Datasets:
None
McCallum, M; Howell, P; Howell, L. 2017. "X-Ray Diffraction data for: PilB from Geobacter metallireducens bound to AMP-PNP. PDB Code 5TSH", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/453.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Matthew McCallum | Data Collector, Depositor | Hospital for Sick Children |
| P. Lynne Howell | Data Collector | Hospital for Sick Children |
| Lynne Howell | PI | University of Toronto |
Processed as P1 in XDS to 2.3 A
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97949
Sweep:
SWEEP1
Files:
/programs/datagrid/453/Matty18_####.img
Images:
1 - 761
Beam:
(150.97, 148.9) -> (150.97, 148.52)
Distance:
320.0 -> 319.53
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.09 | 5.67 | 2.09 |
| Low resolution limit | 91.52 | 91.61 | 2.13 |
| Completeness | 92.1 | 99.4 | 54.4 |
| Multiplicity | 2.1 | 2.1 | 2.0 |
| I/sigma | 5.0 | 9.0 | 1.1 |
| Rmerge | 0.118 | 0.075 | 0.881 |
| CC half | 0.981 | 0.989 | 0.341 |
| Anomalous completeness | 81.2 | 96.8 | 42.6 |
| Anomalous multiplicity | 1.1 | 1.1 | 1.1 |
| Cell | 74.34 | 99.97 | 109.81 | 67.01 | 73.39 | 88.91 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97949
Sweep:
SWEEP1
Files:
/programs/datagrid/453/Matty18_####.img
Images:
1 - 761
Beam:
(150.97, 148.9) -> (150.97, 148.61)
Distance:
320.0 -> 319.78
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.48 | 6.74 | 2.48 |
| Low resolution limit | 96.45 | 96.53 | 2.53 |
| Completeness | 98.5 | 99.7 | 94.7 |
| Multiplicity | 2.1 | 2.1 | 2.1 |
| I/sigma | 11.5 | 76.8 | 0.7 |
| Rmerge | 0.119 | 0.086 | 0.423 |
| CC half | 0.986 | 0.988 | 0.723 |
| Anomalous completeness | 90.6 | 98.8 | 82.8 |
| Anomalous multiplicity | 1.1 | 1.1 | 1.1 |
| Cell | 74.451 | 100.134 | 109.946 | 66.985 | 73.393 | 88.912 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
