X-Ray Diffraction data from human Tie2 FNIII domains, source of 5UTK structure

Data DOI: 10.15785/SBGRID/451 | ID: 451

Publication DOI: 10.1073/pnas.1617800114

5UTK Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Lemmon Laboratory, Yale University School of Medicine

Release Date: June 2, 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/451

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/451 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/451 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/451 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/451 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 451 ; shasum -c files.sha'

Storage requirements: 5.1G

Biological Sample:

human Tie2 FNIII domains

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 23 ID B

Data Creation Date:

Dec. 17, 2011

Related Datasets:

None


Cite this Dataset

Moore, JO; Lemmon, MA. 2017. "X-Ray Diffraction data for: human Tie2 FNIII domains. PDB Code 5UTK", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/451.

Download Citation

Dataset Description

Selenomethionine labelled Tie2 FNIIIa–c collected at the remote wavelength

Project Members

Name Additional Roles Affiliation While Working on the Project
Jason O MooreData Collector, DepositorUniversity of Pennsylvania
Mark A LemmonPIYale University School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.94928

Sweep:

SWEEP4

Files:

/programs/datagrid/451/P6_02_AnoR_1.####

Images:

119 - 160

Beam:

(150.0, 150.29) -> (150.0, 150.25)

Distance:

400.0 -> 399.89

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.38 6.46 2.38
Low resolution limit 49.23 49.24 2.42
Completeness 90.4 97.1 36.7
Multiplicity 2.8 3.1 1.3
I/sigma 13.5 38.6 0.7
Rmerge 0.06 0.036 1.434
CC half 0.995 0.996 0.293
Anomalous completeness 67.3 85.9 12.0
Anomalous multiplicity 1.7 1.7 1.7
Cell 174.5 51.93 111.57 90.0 117.66 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.94928

Sweep:

SWEEP4

Files:

/programs/datagrid/451/P6_02_AnoR_1.####

Images:

119 - 160

Beam:

(150.0, 150.29) -> (150.0, 150.25)

Distance:

400.0 -> 400.52

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.38 6.45 2.38
Low resolution limit 41.67 41.68 2.42
Completeness 90.6 97.2 36.6
Multiplicity 2.8 3.1 1.3
I/sigma 12.1 35.4 0.8
Rmerge 0.06 0.035 1.409
CC half 0.995 0.996 0.295
Anomalous completeness 67.5 85.9 12.0
Anomalous multiplicity 1.7 1.7 1.7
Cell 174.49 51.93 111.57 90.0 117.66 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.94928

Sweep:

SWEEP4

Files:

/programs/datagrid/451/P6_02_AnoR_1.####

Images:

119 - 160

Beam:

(150.0, 150.29) -> (150.0, 150.33)

Distance:

400.0 -> 397.42

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.84 7.68 2.84
Low resolution limit 31.34 31.35 2.89
Completeness 69.0 77.0 7.1
Multiplicity 2.2 2.1 1.1
I/sigma 16.7 37.5 0.9
Rmerge 0.06 0.028 -0.159
CC half 0.991 0.997 0.387
Anomalous completeness 40.5 52.3 0.4
Anomalous multiplicity 1.4 1.4 1.4
Cell 173.745 51.562 110.895 90.0 117.864 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.