X-Ray Diffraction data from VSV N PROTEIN IN COMPLEX WITH NANOBODY 1004, source of 5UKB structure

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Data DOI: 10.15785/SBGRID/449 | ID: 449

Publication DOI: 10.15252/EMBR.201643764

5UKB Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Schwartz Laboratory, Massachusetts Institute of Technology

Release Date: 2 Jun 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/449

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/449 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/449 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/449 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/449 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 449 ; shasum -c files.sha'

Storage requirements: 11G

Biological Sample:

VSV N PROTEIN IN COMPLEX WITH NANOBODY 1004

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein, RNA

Collection Facility:

APS 24-ID-C

Data Creation Date:

17 Oct 2015

Related Datasets:

None


Cite this Dataset

Hanke, L; Knockenhauer, K; Schwartz, T. 2017. "X-Ray Diffraction data for: VSV N PROTEIN IN COMPLEX WITH NANOBODY 1004. PDB Code 5UKB", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/449.

Download Citation

Dataset Description

native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Thomas SchwartzDepositorMIT
Leo HankeMIT
Kevin KnockenhauerData CollectorMIT
Thomas SchwartzPIMassachusetts Institute of Technology

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3d mosflm_beam_centre=223.902649,205.454086 /programs/datagrid//449/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3dii mosflm_beam_centre=223.902649,205.454086 /programs/datagrid//449/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=dials mosflm_beam_centre=223.902649,205.454086 /programs/datagrid//449/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.