X-Ray Diffraction data from VSV N PROTEIN IN COMPLEX WITH NANOBODY 1307, source of 5UK4 structure

Data DOI: 10.15785/SBGRID/448 | ID: 448

Publication DOI: 10.15252/EMBR.201643764

5UK4 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Schwartz Laboratory, Massachusetts Institute of Technology

Release Date: June 2, 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/448

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/448 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/448 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/448 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/448 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 448 ; shasum -c files.sha'

Storage requirements: 11G

Biological Sample:

VSV N PROTEIN IN COMPLEX WITH NANOBODY 1307

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein, RNA

Collection Facility:

APS 24-ID-C

Data Creation Date:

Oct. 17, 2015

Related Datasets:

None


Cite this Dataset

Hanke, L; Knockenhauer, K; Schwartz, T. 2017. "X-Ray Diffraction data for: VSV N PROTEIN IN COMPLEX WITH NANOBODY 1307. PDB Code 5UK4", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/448.

Download Citation

Dataset Description

native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Thomas SchwartzDepositorMIT
Leo HankeMIT
Kevin KnockenhauerData CollectorMIT
Thomas SchwartzPIMassachusetts Institute of Technology

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9791

Sweep:

SWEEP1

Files:

/programs/datagrid/448/N_1307_2_6_1_####.cbf

Images:

1 - 1800

Beam:

(216.64, 222.6) -> (216.64, 222.69)

Distance:

650.0 -> 650.2

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.06 8.31 3.06
Low resolution limit 125.0 125.1 3.11
Completeness 90.5 89.8 82.2
Multiplicity 3.5 3.5 3.2
I/sigma 3.7 11.8 1.1
Rmerge 0.295 0.104 0.932
CC half 0.993 0.969 0.287
Anomalous completeness 81.8 81.2 69.5
Anomalous multiplicity 1.8 1.8 1.8
Cell 147.49 155.449 217.505 79.21 75.662 62.42

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9791

Sweep:

SWEEP1

Files:

/programs/datagrid/448/N_1307_2_6_1_####.cbf

Images:

1 - 1800

Beam:

(216.64, 222.6) -> (216.64, 222.58)

Distance:

650.0 -> 648.91

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.43 9.3 3.43
Low resolution limit 74.73 74.75 3.49
Completeness 93.3 92.2 94.7
Multiplicity 3.6 3.7 3.6
I/sigma 4.0 13.8 1.2
Rmerge 0.23 0.059 0.804
CC half 0.975 0.993 0.677
Anomalous completeness 82.8 83.2 86.2
Anomalous multiplicity 1.9 1.9 1.9
Cell 147.52 155.95 217.41 79.21 75.64 62.23

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9791

Sweep:

SWEEP1

Files:

/programs/datagrid/448/N_1307_2_6_1_####.cbf

Images:

1 - 1800

Beam:

(216.64, 222.6) -> (216.64, 222.58)

Distance:

650.0 -> 649.8

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.43 9.31 3.43
Low resolution limit 209.88 210.27 3.49
Completeness 93.3 92.1 94.7
Multiplicity 3.6 3.7 3.6
I/sigma 4.0 13.8 1.2
Rmerge 0.23 0.059 0.803
CC half 0.975 0.993 0.67
Anomalous completeness 82.8 83.2 86.2
Anomalous multiplicity 1.9 1.9 1.9
Cell 147.52 155.95 217.41 79.21 75.64 62.23

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.