Data DOI: 10.15785/SBGRID/448 | ID: 448
Publication DOI: 10.15252/EMBR.201643764
5UK4 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Schwartz Laboratory, Massachusetts Institute of Technology
Release Date: 2 Jun 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/448
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/448 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/448 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/448 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/448 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 448 ; shasum -c files.sha'
Storage requirements: 11G
Biological Sample:
VSV N PROTEIN IN COMPLEX WITH NANOBODY 1307
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein, RNA
Collection Facility:
APS 24-ID-C
Data Creation Date:
17 Oct 2015
Related Datasets:
None
Hanke, L; Knockenhauer, K; Schwartz, T. 2017. "X-Ray Diffraction data for: VSV N PROTEIN IN COMPLEX WITH NANOBODY 1307. PDB Code 5UK4", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/448.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Thomas Schwartz | Depositor | MIT |
| Leo Hanke | MIT | |
| Kevin Knockenhauer | Data Collector | MIT |
| Thomas Schwartz | PI | Massachusetts Institute of Technology |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/448/N_1307_2_6_1_####.cbf
Images:
1 - 1800
Beam:
(216.64, 222.6) -> (216.64, 222.58)
Distance:
650.0 -> 649.08
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.16 | 8.57 | 3.16 |
| Low resolution limit | 87.0 | 87.03 | 3.21 |
| Completeness | 95.7 | 91.7 | 97.3 |
| Multiplicity | 3.6 | 3.7 | 3.6 |
| I/sigma | 3.4 | 12.9 | 0.5 |
| Rmerge | 0.295 | 0.061 | 1.726 |
| CC half | 0.97 | 0.993 | 0.331 |
| Anomalous completeness | 87.5 | 81.8 | 88.1 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 147.51 | 155.94 | 217.4 | 79.21 | 75.64 | 62.23 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/448/N_1307_2_6_1_####.cbf
Images:
1 - 1800
Beam:
(216.64, 222.6) -> (216.64, 222.58)
Distance:
650.0 -> 649.78
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.16 | 8.58 | 3.16 |
| Low resolution limit | 209.87 | 210.33 | 3.21 |
| Completeness | 95.7 | 91.6 | 97.3 |
| Multiplicity | 3.6 | 3.7 | 3.6 |
| I/sigma | 3.4 | 12.8 | 0.5 |
| Rmerge | 0.293 | 0.061 | 1.708 |
| CC half | 0.97 | 0.993 | 0.348 |
| Anomalous completeness | 87.5 | 82.1 | 88.2 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 147.51 | 155.94 | 217.4 | 79.21 | 75.64 | 62.23 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/448/N_1307_2_6_1_####.cbf
Images:
1 - 1800
Beam:
(216.64, 222.6) -> (216.64, 222.58)
Distance:
650.0 -> 650.11
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.97 | 8.06 | 2.97 |
| Low resolution limit | 209.88 | 210.4 | 3.02 |
| Completeness | 94.5 | 93.4 | 80.1 |
| Multiplicity | 3.7 | 3.7 | 3.4 |
| I/sigma | 5.1 | 25.7 | 0.5 |
| Rmerge | 0.247 | 0.084 | 1.824 |
| CC half | 0.879 | 0.782 | 0.379 |
| Anomalous completeness | 88.0 | 88.4 | 66.4 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 147.493 | 155.937 | 217.404 | 79.209 | 75.646 | 62.251 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
