Data DOI: 10.15785/SBGRID/445 | ID: 445
6NTR Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Crosson Laboratory, University of Chicago
Release Date: 11 Apr 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/445
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/445 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/445 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/445 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/445 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 445 ; shasum -c files.sha'
Storage requirements: 3.9G
Biological Sample:
Brucella abortus bab1_1186 (DUF1849)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
19-ID, APS, Argonne National Lab
Data Creation Date:
12 Jan 2016
Related Datasets:
None
Babnigg, G; Herrou, J; Joachimiak, A; Kim, Y; Crosson, S. 2017. "X-Ray Diffraction data for: Brucella abortus bab1_1186 (DUF1849). PDB Code 6NTR", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/445.
SeMet Dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Gyorgy Babnigg | Argonne National Lab | |
| Julien Herrou | University of Chicago | |
| Andrzej Joachimiak | Argonne National Lab | |
| Youngchang Kim | Data Collector | Argonne National Lab |
| Sean Crosson | Depositor, PI | University of Chicago |
Processed in HKL3000. Twinned. The data were initially processed and scaled P21. Data were finally processed in the lower symmetry space group P1
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97929
Sweep:
SWEEP2
Files:
/programs/datagrid/445/m1f2e.####.img
Images:
25 - 220
Beam:
(154.5, 159.98) -> (154.5, 162.5)
Distance:
329.92 -> 329.94
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.95 | 5.28 | 1.95 |
| Low resolution limit | 28.43 | 28.43 | 1.98 |
| Completeness | 94.4 | 93.8 | 66.7 |
| Multiplicity | 4.0 | 4.1 | 2.3 |
| I/sigma | 14.9 | 41.3 | 0.6 |
| Rmerge | 0.041 | 0.031 | 2.274 |
| CC half | 0.998 | 0.992 | 0.354 |
| Anomalous completeness | 87.5 | 85.7 | 45.9 |
| Anomalous multiplicity | 2.1 | 2.1 | 2.1 |
| Cell | 47.28 | 84.47 | 68.76 | 90.0 | 101.08 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97929
Sweep:
SWEEP2
Files:
/programs/datagrid/445/m1f2e.####.img
Images:
25 - 220
Beam:
(154.5, 159.98) -> (154.5, 162.49)
Distance:
329.92 -> 329.91
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.95 | 5.29 | 1.95 |
| Low resolution limit | 46.4 | 46.41 | 1.98 |
| Completeness | 94.4 | 93.5 | 66.6 |
| Multiplicity | 4.0 | 4.1 | 2.3 |
| I/sigma | 15.0 | 42.0 | 0.5 |
| Rmerge | 0.041 | 0.031 | 2.246 |
| CC half | 0.998 | 0.991 | 0.358 |
| Anomalous completeness | 87.5 | 85.3 | 45.9 |
| Anomalous multiplicity | 2.1 | 2.1 | 2.1 |
| Cell | 47.28 | 84.47 | 68.76 | 90.0 | 101.08 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97929
Sweep:
SWEEP2
Files:
/programs/datagrid/445/m1f2e.####.img
Images:
25 - 220
Beam:
(154.5, 159.98) -> (154.5, 162.49)
Distance:
329.92 -> 327.82
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.89 | 5.14 | 1.89 |
| Low resolution limit | 52.4 | 52.42 | 1.93 |
| Completeness | 92.2 | 100.0 | 53.1 |
| Multiplicity | 4.1 | 4.4 | 2.4 |
| I/sigma | 16.0 | 55.2 | 0.1 |
| Rmerge | 0.052 | 0.054 | 5.63 |
| CC half | 0.992 | 0.966 | 0.362 |
| Anomalous completeness | 88.2 | 100.0 | 40.8 |
| Anomalous multiplicity | 2.1 | 2.1 | 2.1 |
| Cell | 47.017 | 83.968 | 68.373 | 90.0 | 101.256 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
