Data DOI: 10.15785/SBGRID/444 | ID: 444
5UC0 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Crosson Laboratory, University of Chicago
Release Date: 11 Apr 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/444
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/444 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/444 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/444 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/444 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 444 ; shasum -c files.sha'
Storage requirements: 2.6G
Biological Sample:
Brucella abortus Bab1_1612 (DUF1134/COG5400)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
19-ID, APS, Argonne National Lab
Data Creation Date:
12 Jan 2016
Related Datasets:
None
Babnigg, G; Herrou, J; Joachimiak, A; Kim, Y; Crosson, S. 2017. "X-Ray Diffraction data for: Brucella abortus Bab1_1612 (DUF1134/COG5400). PDB Code 5UC0", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/444.
SeMet dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Gyorgy Babnigg | Argonne National Lab | |
| Julien Herrou | University of Chicago | |
| Andrzej Joachimiak | Argonne National Lab | |
| Youngchang Kim | Data Collector | Argonne National Lab |
| Sean Crosson | Depositor, PI | University of Chicago |
Processed in HKL3000; indexed in P63.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97929
Sweep:
SWEEP1
Files:
/programs/datagrid/444/m2b5g-2.####.img
Images:
1 - 144
Beam:
(154.5, 159.98) -> (154.5, 162.31)
Distance:
230.0 -> 230.43
Spacegroup:
P 63 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.55 | 4.2 | 1.55 |
| Low resolution limit | 32.67 | 32.67 | 1.58 |
| Completeness | 97.0 | 99.2 | 75.2 |
| Multiplicity | 16.3 | 15.0 | 12.2 |
| I/sigma | 25.8 | 76.1 | 1.0 |
| Rmerge | 0.054 | 0.023 | 2.479 |
| CC half | 1.0 | 0.999 | 0.379 |
| Anomalous completeness | 97.3 | 99.1 | 75.8 |
| Anomalous multiplicity | 8.7 | 8.7 | 8.7 |
| Cell | 113.16 | 113.16 | 64.32 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97929
Sweep:
SWEEP1
Files:
/programs/datagrid/444/m2b5g-2.####.img
Images:
1 - 144
Beam:
(154.5, 159.98) -> (154.5, 162.32)
Distance:
230.0 -> 230.31
Spacegroup:
P 63 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.56 | 4.23 | 1.56 |
| Low resolution limit | 53.77 | 53.8 | 1.59 |
| Completeness | 97.5 | 99.2 | 78.8 |
| Multiplicity | 16.4 | 15.0 | 12.3 |
| I/sigma | 26.2 | 75.9 | 1.0 |
| Rmerge | 0.054 | 0.023 | 2.315 |
| CC half | 1.0 | 0.999 | 0.395 |
| Anomalous completeness | 97.8 | 99.1 | 79.2 |
| Anomalous multiplicity | 8.7 | 8.7 | 8.7 |
| Cell | 113.16 | 113.16 | 64.32 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97929
Sweep:
SWEEP1
Files:
/programs/datagrid/444/m2b5g-2.####.img
Images:
1 - 144
Beam:
(154.5, 159.98) -> (154.5, 162.31)
Distance:
230.0 -> 230.36
Spacegroup:
P 63 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.52 | 4.13 | 1.52 |
| Low resolution limit | 56.61 | 56.65 | 1.55 |
| Completeness | 95.7 | 100.0 | 68.0 |
| Multiplicity | 16.3 | 15.6 | 11.5 |
| I/sigma | 18.2 | 93.2 | 0.1 |
| Rmerge | 0.063 | 0.027 | 4.644 |
| CC half | 0.999 | 0.999 | 0.314 |
| Anomalous completeness | 95.8 | 100.0 | 67.6 |
| Anomalous multiplicity | 8.7 | 8.7 | 8.7 |
| Cell | 113.227 | 113.227 | 64.329 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
