Data DOI: 10.15785/SBGRID/440 | ID: 440
Publication DOI: 10.1016/j.molcel.2013.11.013
4JDJ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Boggon Laboratory, Yale University School of Medicine
Release Date: March 28, 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/440
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/440 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/440 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/440 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/440 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 440 ; shasum -c files.sha'
Storage requirements: 2.1G
Biological Sample:
PAK4 F461V with PAKtide-T
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
NSLS X25
Data Creation Date:
Jan. 10, 2011
Related Datasets:
None
Ha, BHak; Boggon, TJ. 2017. "X-Ray Diffraction data for: PAK4 F461V with PAKtide-T. PDB Code 4JDJ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/440.
X-ray diffraction
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Titus J Boggon | Depositor | Yale University |
| Byung Hak Ha | Data Collector | Yale University |
| Titus Boggon | PI | Yale University School of Medicine |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.1
Sweep:
SWEEP1
Files:
/programs/datagrid/440/5p2_4_#####.cbf
Images:
1 - 360
Beam:
(224.46, 221.02) -> (224.46, 219.83)
Distance:
400.0 -> 399.53
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.11 | 5.73 | 2.11 |
| Low resolution limit | 61.76 | 61.78 | 2.15 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 10.6 | 10.0 | 6.6 |
| I/sigma | 12.2 | 32.1 | 1.3 |
| Rmerge | 0.124 | 0.048 | 1.303 |
| CC half | 0.999 | 0.999 | 0.283 |
| Anomalous completeness | 99.8 | 100.0 | 97.1 |
| Anomalous multiplicity | 5.8 | 5.8 | 5.8 |
| Cell | 61.756 | 61.756 | 181.681 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.1
Sweep:
SWEEP1
Files:
/programs/datagrid/440/5p2_4_#####.cbf
Images:
1 - 360
Beam:
(224.46, 221.02) -> (224.46, 218.88)
Distance:
400.0 -> 400.37
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.14 | 5.81 | 2.14 |
| Low resolution limit | 58.55 | 58.57 | 2.18 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 12.1 | 10.7 | 9.0 |
| I/sigma | 17.1 | 52.8 | 1.1 |
| Rmerge | 0.091 | 0.031 | 1.759 |
| CC half | 1.0 | 1.0 | 0.362 |
| Anomalous completeness | 99.9 | 99.9 | 99.9 |
| Anomalous multiplicity | 6.7 | 6.7 | 6.7 |
| Cell | 61.84 | 61.84 | 181.79 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.1
Sweep:
SWEEP1
Files:
/programs/datagrid/440/5p2_4_#####.cbf
Images:
1 - 360
Beam:
(224.46, 221.02) -> (224.46, 218.9)
Distance:
400.0 -> 400.2
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.15 | 5.83 | 2.15 |
| Low resolution limit | 58.55 | 58.57 | 2.19 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 12.2 | 10.7 | 9.5 |
| I/sigma | 17.3 | 53.0 | 1.1 |
| Rmerge | 0.091 | 0.031 | 1.828 |
| CC half | 1.0 | 1.0 | 0.353 |
| Anomalous completeness | 99.9 | 100.0 | 99.9 |
| Anomalous multiplicity | 6.7 | 6.7 | 6.7 |
| Cell | 61.84 | 61.84 | 181.79 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.1
Sweep:
SWEEP1
Files:
/programs/datagrid/440/5p2_4_#####.cbf
Images:
1 - 360
Beam:
(224.46, 221.02) -> (224.46, 218.88)
Distance:
400.0 -> 400.31
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.08 | 5.64 | 2.08 |
| Low resolution limit | 61.94 | 61.97 | 2.12 |
| Completeness | 100.0 | 100.0 | 97.8 |
| Multiplicity | 11.3 | 10.7 | 6.5 |
| I/sigma | 15.3 | 43.5 | 1.1 |
| Rmerge | 0.092 | 0.034 | 1.386 |
| CC half | 0.999 | 1.0 | 0.477 |
| Anomalous completeness | 99.8 | 100.0 | 96.6 |
| Anomalous multiplicity | 6.2 | 6.2 | 6.2 |
| Cell | 61.94 | 61.94 | 182.101 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
