Data DOI: 10.15785/SBGRID/438 | ID: 438
Publication DOI: 10.1016/j.molcel.2013.11.013
4JDI Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Boggon Laboratory, Yale University School of Medicine
Release Date: March 28, 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/438
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/438 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/438 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/438 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/438 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 438 ; shasum -c files.sha'
Storage requirements: 3.2G
Biological Sample:
PAK4 with PAKtide-S
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24-ID-E
Data Creation Date:
June 18, 2012
Related Datasets:
None
Ha, BHak; Boggon, TJ. 2017. "X-Ray Diffraction data for: PAK4 with PAKtide-S. PDB Code 4JDI", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/438.
X-ray diffraction
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Titus J Boggon | Depositor | Yale University |
| Byung Hak Ha | Data Collector | Yale University |
| Titus Boggon | PI | Yale University School of Medicine |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97922
Sweep:
SWEEP1
Files:
/programs/datagrid/438/bh-tjb5-p09_1_###.img
Images:
1 - 180
Beam:
(156.73, 160.74) -> (156.73, 159.3)
Distance:
230.0 -> 229.95
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.79 | 4.86 | 1.79 |
| Low resolution limit | 60.6 | 60.63 | 1.82 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 14.0 | 11.9 | 14.4 |
| I/sigma | 19.4 | 50.5 | 1.0 |
| Rmerge | 0.067 | 0.034 | 2.925 |
| CC half | 0.999 | 0.999 | 0.409 |
| Anomalous completeness | 99.9 | 99.6 | 99.9 |
| Anomalous multiplicity | 7.6 | 7.6 | 7.6 |
| Cell | 61.95 | 61.95 | 181.8 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97922
Sweep:
SWEEP1
Files:
/programs/datagrid/438/bh-tjb5-p09_1_###.img
Images:
1 - 180
Beam:
(156.73, 160.74) -> (156.73, 159.31)
Distance:
230.0 -> 229.89
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.79 | 4.86 | 1.79 |
| Low resolution limit | 51.19 | 51.21 | 1.82 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 14.0 | 12.0 | 14.4 |
| I/sigma | 19.4 | 50.5 | 1.0 |
| Rmerge | 0.067 | 0.034 | 2.922 |
| CC half | 0.999 | 0.999 | 0.39 |
| Anomalous completeness | 99.9 | 99.6 | 99.9 |
| Anomalous multiplicity | 7.6 | 7.6 | 7.6 |
| Cell | 61.95 | 61.95 | 181.8 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97922
Sweep:
SWEEP1
Files:
/programs/datagrid/438/bh-tjb5-p09_1_###.img
Images:
1 - 180
Beam:
(156.73, 160.74) -> (156.73, 159.29)
Distance:
230.0 -> 230.0
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.88 | 5.1 | 1.88 |
| Low resolution limit | 51.26 | 51.28 | 1.91 |
| Completeness | 99.3 | 99.9 | 84.3 |
| Multiplicity | 12.5 | 12.3 | 3.9 |
| I/sigma | 19.3 | 44.7 | 0.8 |
| Rmerge | 0.068 | 0.043 | 1.498 |
| CC half | 0.999 | 0.998 | 0.152 |
| Anomalous completeness | 98.0 | 99.4 | 69.0 |
| Anomalous multiplicity | 6.8 | 6.8 | 6.8 |
| Cell | 62.051 | 62.051 | 181.969 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
