X-Ray Diffraction data from PAK4 with PAKtide-S, source of 4JDI structure

Data DOI: 10.15785/SBGRID/438 | ID: 438

Publication DOI: 10.1016/j.molcel.2013.11.013

4JDI Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Boggon Laboratory, Yale University School of Medicine

Release Date: 28 Mar 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/438

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/438 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/438 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/438 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/438 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 438 ; shasum -c files.sha'

Storage requirements: 3.2G

Biological Sample:

PAK4 with PAKtide-S

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 24-ID-E

Data Creation Date:

18 Jun 2012

Related Datasets:

None


Cite this Dataset

Ha, BHak; Boggon, TJ. 2017. "X-Ray Diffraction data for: PAK4 with PAKtide-S. PDB Code 4JDI", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/438.

Download Citation

Dataset Description

X-ray diffraction

Project Members

Name Additional Roles Affiliation While Working on the Project
Titus J BoggonDepositorYale University
Byung Hak HaData CollectorYale University
Titus BoggonPIYale University School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97922

Sweep:

SWEEP1

Files:

/programs/datagrid/438/bh-tjb5-p09_1_###.img

Images:

1 - 180

Beam:

(156.73, 160.74) -> (156.73, 159.3)

Distance:

230.0 -> 229.95

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.83 4.97 1.83
Low resolution limit 60.6 60.63 1.86
Completeness 100.0 100.0 100.0
Multiplicity 14.0 12.0 14.5
I/sigma 20.5 49.9 1.3
Rmerge 0.065 0.039 2.243
CC half 0.999 0.997 0.583
Anomalous completeness 100.0 99.9 99.9
Anomalous multiplicity 7.6 7.6 7.6
Cell 61.95 61.95 181.8 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97922

Sweep:

SWEEP1

Files:

/programs/datagrid/438/bh-tjb5-p09_1_###.img

Images:

1 - 180

Beam:

(156.73, 160.74) -> (156.73, 159.31)

Distance:

230.0 -> 229.89

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.82 4.94 1.82
Low resolution limit 60.6 60.63 1.85
Completeness 100.0 100.0 100.0
Multiplicity 14.0 12.0 14.4
I/sigma 20.2 50.0 1.3
Rmerge 0.066 0.039 2.317
CC half 0.999 0.997 0.534
Anomalous completeness 100.0 99.9 99.9
Anomalous multiplicity 7.6 7.6 7.6
Cell 61.95 61.95 181.8 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97922

Sweep:

SWEEP1

Files:

/programs/datagrid/438/bh-tjb5-p09_1_###.img

Images:

1 - 180

Beam:

(156.73, 160.74) -> (156.73, 159.29)

Distance:

230.0 -> 229.97

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.78 4.83 1.78
Low resolution limit 58.73 58.76 1.81
Completeness 100.0 100.0 97.2
Multiplicity 14.0 12.6 14.3
I/sigma 17.0 45.0 2.2
Rmerge 0.078 0.055 0.94
CC half 0.998 0.995 0.459
Anomalous completeness 99.8 100.0 96.8
Anomalous multiplicity 7.6 7.6 7.6
Cell 62.048 62.048 181.963 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.