Data DOI: 10.15785/SBGRID/427 | ID: 427
Publication DOI: 10.1038/ncomms14158
5TOK Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McLellan Laboratory, University of Texas at Austin
Release Date: 3 Mar 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/427
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/427 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/427 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/427 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/427 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 427 ; shasum -c files.sha'
Storage requirements: 3.2G
Biological Sample:
VHH-L66 in Complex with Prefusion RSV F
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
19-ID, SBC, APS, Chicago, IL
Data Creation Date:
23 Jul 2015
Related Datasets:
None
Gilman, MS.A.; McLellan, J. 2017. "X-Ray Diffraction data for: VHH-L66 in Complex with Prefusion RSV F. PDB Code 5TOK", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/427.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Morgan S.A. Gilman | Data Collector, Depositor | Geisel School of Medicine at Dartmouth College |
| Jason McLellan | PI | University of Texas at Austin |
X beam=153.1 Y beam=162.5
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97934
Sweep:
SWEEP1
Files:
/programs/datagrid/427/NbL66_X1.####.img
Images:
1 - 180
Beam:
(154.5, 159.98) -> (154.5, 162.52)
Distance:
463.21 -> 463.65
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.68 | 9.94 | 3.68 |
| Low resolution limit | 40.13 | 40.13 | 3.74 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 5.5 | 4.9 | 5.6 |
| I/sigma | 5.6 | 23.6 | 0.9 |
| Rmerge | 0.281 | 0.043 | 1.824 |
| CC half | 0.986 | 0.995 | 0.308 |
| Anomalous completeness | 98.5 | 95.7 | 99.2 |
| Anomalous multiplicity | 2.9 | 2.9 | 2.9 |
| Cell | 139.0 | 139.0 | 222.25 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97934
Sweep:
SWEEP1
Files:
/programs/datagrid/427/NbL66_X1.####.img
Images:
1 - 180
Beam:
(154.5, 159.98) -> (154.5, 162.52)
Distance:
463.21 -> 464.06
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.69 | 10.0 | 3.69 |
| Low resolution limit | 58.93 | 58.94 | 3.75 |
| Completeness | 100.0 | 100.0 | 99.9 |
| Multiplicity | 5.5 | 4.9 | 5.6 |
| I/sigma | 5.6 | 23.1 | 0.9 |
| Rmerge | 0.279 | 0.044 | 1.816 |
| CC half | 0.986 | 0.994 | 0.322 |
| Anomalous completeness | 98.5 | 95.7 | 99.2 |
| Anomalous multiplicity | 2.9 | 2.9 | 2.9 |
| Cell | 139.01 | 139.01 | 222.25 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97934
Sweep:
SWEEP1
Files:
/programs/datagrid/427/NbL66_X1.####.img
Images:
1 - 180
Beam:
(154.5, 159.98) -> (154.5, 162.53)
Distance:
463.21 -> 463.52
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.75 | 10.14 | 3.75 |
| Low resolution limit | 44.5 | 44.5 | 3.82 |
| Completeness | 73.1 | 68.0 | 72.3 |
| Multiplicity | 2.6 | 2.8 | 2.5 |
| I/sigma | 2.4 | 15.8 | 0.3 |
| Rmerge | 0.263 | 0.184 | 1.461 |
| CC half | 0.878 | 0.825 | 0.226 |
| Anomalous completeness | 61.2 | 65.4 | 57.2 |
| Anomalous multiplicity | 1.5 | 1.5 | 1.5 |
| Cell | 239.872 | 138.776 | 221.763 | 90.0 | 89.919 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
