X-Ray Diffraction data from VHH-L66 in Complex with Prefusion RSV F, source of 5TOK structure

Data DOI: 10.15785/SBGRID/427 | ID: 427

Publication DOI: 10.1038/ncomms14158

5TOK Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McLellan Laboratory, University of Texas at Austin

Release Date: March 3, 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/427

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/427 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/427 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/427 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/427 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 427 ; shasum -c files.sha'

Storage requirements: 3.2G

Biological Sample:

VHH-L66 in Complex with Prefusion RSV F

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

19-ID, SBC, APS, Chicago, IL

Data Creation Date:

July 23, 2015

Related Datasets:

None


Cite this Dataset

Gilman, MS.A.; McLellan, J. 2017. "X-Ray Diffraction data for: VHH-L66 in Complex with Prefusion RSV F. PDB Code 5TOK", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/427.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Morgan S.A. GilmanData Collector, DepositorGeisel School of Medicine at Dartmouth College
Jason McLellanPIUniversity of Texas at Austin

Reprocessing Instructions

X beam=153.1 Y beam=162.5

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97934

Sweep:

SWEEP1

Files:

/programs/datagrid/427/NbL66_X1.####.img

Images:

1 - 180

Beam:

(154.5, 159.98) -> (154.5, 162.52)

Distance:

463.21 -> 463.65

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 5.34 14.29 5.34
Low resolution limit 40.13 40.13 5.43
Completeness 100.0 100.0 100.0
Multiplicity 5.3 4.5 5.4
I/sigma 11.2 25.3 4.4
Rmerge 0.11 0.036 0.364
CC half 0.994 0.989 0.926
Anomalous completeness 97.6 93.2 98.4
Anomalous multiplicity 2.9 2.9 2.9
Cell 139.0 139.0 222.24 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97934

Sweep:

SWEEP1

Files:

/programs/datagrid/427/NbL66_X1.####.img

Images:

1 - 180

Beam:

(154.5, 159.98) -> (154.5, 162.52)

Distance:

463.21 -> 464.06

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 5.06 13.68 5.06
Low resolution limit 58.92 58.93 5.15
Completeness 100.0 100.0 100.0
Multiplicity 5.3 4.5 5.5
I/sigma 10.2 24.5 5.1
Rmerge 0.123 0.037 0.305
CC half 0.994 0.99 0.95
Anomalous completeness 97.7 93.7 98.6
Anomalous multiplicity 2.9 2.9 2.9
Cell 139.0 139.0 222.24 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97934

Sweep:

SWEEP1

Files:

/programs/datagrid/427/NbL66_X1.####.img

Images:

1 - 180

Beam:

(154.5, 159.98) -> (154.5, 162.52)

Distance:

463.21 -> 462.83

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 4.15 11.18 4.15
Low resolution limit 40.05 40.05 4.22
Completeness 27.6 42.2 35.3
Multiplicity 1.3 1.4 1.5
I/sigma 3.7 11.2 1.2
Rmerge 0.149 0.035 0.542
CC half 0.98 0.995 0.701
Anomalous completeness 6.2 13.0 10.6
Anomalous multiplicity 1.1 1.1 1.1
Cell 240.183 138.753 221.689 90.0 90.062 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.