Data DOI: 10.15785/SBGRID/425 | ID: 425
Publication DOI: 10.1038/ncomms14158
5TOJ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McLellan Laboratory, University of Texas at Austin
Release Date: 3 Mar 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/425
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/425 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/425 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/425 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/425 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 425 ; shasum -c files.sha'
Storage requirements: 7.6G
Biological Sample:
VHH-4 in Complex with Prefusion RSV F
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
23-1ID, GM-CA, APS, Chicago, IL
Data Creation Date:
21 Aug 2015
Related Datasets:
None
Gilman, MS.A.; McLellan, J. 2017. "X-Ray Diffraction data for: VHH-4 in Complex with Prefusion RSV F. PDB Code 5TOJ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/425.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Morgan S.A. Gilman | Data Collector, Depositor | Geisel School of Medicine at Dartmouth College |
| Jason McLellan | PI | University of Texas at Austin |
X beam=149.8 Y beam=150.2
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0332
Sweep:
SWEEP1
Files:
/programs/datagrid/425/N4_X3_P5P6_3.#####
Images:
1 - 240
Beam:
(150.29, 150.22) -> (150.29, 150.27)
Distance:
450.5 -> 451.3
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.2 | 8.67 | 3.2 |
| Low resolution limit | 50.13 | 50.13 | 3.26 |
| Completeness | 100.0 | 100.0 | 99.6 |
| Multiplicity | 7.5 | 6.8 | 7.0 |
| I/sigma | 10.4 | 35.8 | 0.7 |
| Rmerge | 0.14 | 0.034 | 2.846 |
| CC half | 0.998 | 0.999 | 0.411 |
| Anomalous completeness | 99.9 | 99.9 | 99.3 |
| Anomalous multiplicity | 3.9 | 3.9 | 3.9 |
| Cell | 173.64 | 173.64 | 154.0 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0332
Sweep:
SWEEP1
Files:
/programs/datagrid/425/N4_X3_P5P6_3.#####
Images:
1 - 240
Beam:
(150.29, 150.22) -> (150.29, 150.27)
Distance:
450.5 -> 451.06
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.19 | 8.65 | 3.19 |
| Low resolution limit | 53.32 | 53.33 | 3.25 |
| Completeness | 100.0 | 100.0 | 99.4 |
| Multiplicity | 7.5 | 6.8 | 6.7 |
| I/sigma | 10.3 | 35.8 | 0.7 |
| Rmerge | 0.141 | 0.034 | 2.878 |
| CC half | 0.998 | 0.999 | 0.381 |
| Anomalous completeness | 99.9 | 99.9 | 99.1 |
| Anomalous multiplicity | 3.9 | 3.9 | 3.9 |
| Cell | 173.64 | 173.64 | 154.01 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0332
Sweep:
SWEEP1
Files:
/programs/datagrid/425/N4_X3_P5P6_3.#####
Images:
1 - 240
Beam:
(150.29, 150.22) -> (150.29, 150.36)
Distance:
450.5 -> 448.81
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.04 | 8.26 | 3.04 |
| Low resolution limit | 107.57 | 107.64 | 3.1 |
| Completeness | 99.1 | 100.0 | 88.5 |
| Multiplicity | 7.2 | 7.1 | 5.0 |
| I/sigma | 6.2 | 43.0 | 0.7 |
| Rmerge | 0.196 | 0.049 | 1.262 |
| CC half | 0.806 | 0.989 | 0.234 |
| Anomalous completeness | 99.0 | 100.0 | 88.4 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 173.765 | 173.765 | 153.819 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
