Data DOI: 10.15785/SBGRID/424 | ID: 424
Publication DOI: 10.1038/s41591-018-0070-2
5UTZ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 3 Jul 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/424
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/424 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/424 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/424 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/424 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 424 ; shasum -c files.sha'
Biological Sample:
IL-2 complex with Fab
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ALS 8.2.1
Data Creation Date:
11 May 2015
Related Datasets:
None
Jude, KM; Garcia, KC; Garcia, K. 2018. "X-Ray Diffraction data for: IL-2 complex with Fab. PDB Code 5UTZ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/424.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Data Collector, Depositor | Howard Hughes Medical Institute |
| K C Garcia | Stanford University/Howard Hughes Medical Institute | |
| K. Christopher Garcia | PI | Stanford University |
data processed with XDS
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.99987
Sweep:
SWEEP1
Files:
/programs/datagrid/424/E13_10_###.img
Images:
1 - 157
Beam:
(154.9, 163.1) -> (154.9, 163.0)
Distance:
390.0 -> 389.96
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.62 | 7.11 | 2.62 |
| Low resolution limit | 86.46 | 86.51 | 2.67 |
| Completeness | 99.1 | 96.6 | 99.9 |
| Multiplicity | 3.2 | 3.2 | 3.0 |
| I/sigma | 7.1 | 21.1 | 0.7 |
| Rmerge | 0.124 | 0.033 | 1.308 |
| CC half | 0.988 | 0.997 | 0.252 |
| Anomalous completeness | 92.7 | 87.9 | 89.3 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 86.3 | 146.26 | 107.68 | 90.0 | 95.43 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.99987
Sweep:
SWEEP1
Files:
/programs/datagrid/424/E13_10_###.img
Images:
1 - 157
Beam:
(154.9, 163.1) -> (154.9, 163.0)
Distance:
390.0 -> 391.2
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.62 | 7.11 | 2.62 |
| Low resolution limit | 74.09 | 74.12 | 2.67 |
| Completeness | 99.1 | 96.5 | 99.9 |
| Multiplicity | 3.2 | 3.2 | 3.0 |
| I/sigma | 7.1 | 21.1 | 0.7 |
| Rmerge | 0.124 | 0.033 | 1.343 |
| CC half | 0.988 | 0.997 | 0.242 |
| Anomalous completeness | 92.7 | 87.4 | 89.6 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 86.31 | 146.27 | 107.69 | 90.0 | 95.42 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.99987
Sweep:
SWEEP1
Files:
/programs/datagrid/424/E13_10_###.img
Images:
1 - 157
Beam:
(154.9, 163.1) -> (154.9, 163.01)
Distance:
390.0 -> 389.69
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.63 | 7.15 | 2.63 |
| Low resolution limit | 85.9 | 85.94 | 2.68 |
| Completeness | 99.4 | 98.4 | 95.0 |
| Multiplicity | 3.4 | 3.4 | 3.2 |
| I/sigma | 5.9 | 30.6 | 0.2 |
| Rmerge | 0.218 | 0.064 | 2.379 |
| CC half | 0.898 | 0.988 | 0.131 |
| Anomalous completeness | 97.0 | 96.4 | 91.1 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 85.716 | 145.216 | 107.031 | 90.0 | 95.542 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
