Data DOI: 10.15785/SBGRID/416 | ID: 416
Publication DOI: 10.1016/j.immuni.2017.02.017
5T5W Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 7 Nov 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/416
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/416 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/416 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/416 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/416 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 416 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
Engineered Interferon lambda in complex with IFN-lambdaR1 and IL10Rbeta
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 12-2, SSRL
Data Creation Date:
28 Feb 2016
Related Datasets:
None
Jude, KM; Mendoza, JL; Garcia, K. 2017. "X-Ray Diffraction data for: Engineered Interferon lambda in complex with IFN-lambdaR1 and IL10Rbeta. PDB Code 5T5W", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/416.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Depositor | Howard Hughes Medical Institute |
| Juan L Mendoza | Data Collector | Stanford University |
| K. Christopher Garcia | PI | Stanford University |
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/416/IFNternaA7_2_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.78)
Distance:
500.0 -> 502.3
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.09 | 8.37 | 3.09 |
| Low resolution limit | 49.01 | 49.02 | 3.14 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 9.6 | 8.3 | 10.3 |
| I/sigma | 8.4 | 23.2 | 0.6 |
| Rmerge | 0.157 | 0.062 | 3.093 |
| CC half | 0.998 | 0.997 | 0.317 |
| Anomalous completeness | 99.8 | 99.4 | 100.0 |
| Anomalous multiplicity | 5.1 | 5.1 | 5.1 |
| Cell | 105.93 | 105.93 | 129.28 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/416/IFNternaA7_2_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.8)
Distance:
500.0 -> 502.54
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.07 | 8.32 | 3.07 |
| Low resolution limit | 49.01 | 49.01 | 3.12 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 9.6 | 8.3 | 10.3 |
| I/sigma | 8.3 | 23.1 | 0.7 |
| Rmerge | 0.159 | 0.062 | 3.172 |
| CC half | 0.997 | 0.997 | 0.323 |
| Anomalous completeness | 99.8 | 99.4 | 100.0 |
| Anomalous multiplicity | 5.1 | 5.1 | 5.1 |
| Cell | 105.92 | 105.92 | 129.28 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/416/IFNternaA7_2_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.84)
Distance:
500.0 -> 501.05
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.85 | 7.73 | 2.85 |
| Low resolution limit | 91.51 | 91.56 | 2.9 |
| Completeness | 99.9 | 100.0 | 95.6 |
| Multiplicity | 9.8 | 9.0 | 10.3 |
| I/sigma | 4.3 | 29.7 | 0.1 |
| Rmerge | 0.206 | 0.077 | 10.024 |
| CC half | 0.772 | 0.633 | 0.296 |
| Anomalous completeness | 99.7 | 99.9 | 95.2 |
| Anomalous multiplicity | 5.2 | 5.2 | 5.2 |
| Cell | 105.669 | 105.669 | 128.975 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
