Data DOI: 10.15785/SBGRID/414 | ID: 414
Publication DOI: 10.1093/nar/gkw1288
5UBF Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Jeruzalmi Laboratory, City College of New York
Release Date: 6 Jan 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/414
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/414 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/414 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/414 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/414 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 414 ; shasum -c files.sha'
Storage requirements: 5.9G
Biological Sample:
RctB-155-483
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS beamline 24-ID-C
Data Creation Date:
23 Jul 2014
Related Datasets:
None
Orlova, N; Waldor, MK.; Jeruzalmi, D. 2017. "X-Ray Diffraction data for: RctB-155-483. PDB Code 5UBF", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/414.
x-ray diffraction dataset, SeMet labeled protein, wavelength 0.9792
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Natalia Orlova | Data Collector, Depositor | The City College of New York |
| David Jeruzalmi | The City College of New York | |
| Matthew K. Waldor | Harvard Medical School | |
| David Jeruzalmi | PI | City College of New York |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/414/RS033-43f-_1_####.cbf
Images:
1 - 1000
Beam:
(217.18, 220.68) -> (217.18, 220.7)
Distance:
400.0 -> 400.36
Spacegroup:
H 3
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.46 | 6.68 | 2.46 |
| Low resolution limit | 64.16 | 64.18 | 2.5 |
| Completeness | 99.8 | 99.6 | 99.9 |
| Multiplicity | 5.8 | 5.6 | 6.0 |
| I/sigma | 15.6 | 38.6 | 0.8 |
| Rmerge | 0.043 | 0.03 | 2.084 |
| CC half | 0.99 | 0.985 | 0.304 |
| Anomalous completeness | 97.7 | 95.9 | 99.2 |
| Anomalous multiplicity | 2.9 | 2.9 | 2.9 |
| Cell | 128.32 | 128.32 | 127.64 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/414/RS033-43f-_1_####.cbf
Images:
1 - 1000
Beam:
(217.18, 220.68) -> (217.18, 220.69)
Distance:
400.0 -> 399.91
Spacegroup:
P 31
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.55 | 6.92 | 2.55 |
| Low resolution limit | 63.83 | 63.84 | 2.59 |
| Completeness | 99.7 | 99.6 | 99.8 |
| Multiplicity | 5.8 | 5.8 | 5.9 |
| I/sigma | 5.8 | 12.7 | 0.4 |
| Rmerge | 0.067 | 0.03 | 4.139 |
| CC half | 0.986 | 0.98 | 0.324 |
| Anomalous completeness | 97.9 | 97.6 | 98.8 |
| Anomalous multiplicity | 2.9 | 2.9 | 2.9 |
| Cell | 128.33 | 128.33 | 127.65 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/414/RS033-43f-_1_####.cbf
Images:
1 - 1000
Beam:
(217.18, 220.68) -> (217.18, 220.69)
Distance:
400.0 -> 399.87
Spacegroup:
R 3
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.36 | 6.42 | 2.36 |
| Low resolution limit | 64.25 | 64.27 | 2.41 |
| Completeness | 99.8 | 99.8 | 98.9 |
| Multiplicity | 5.8 | 5.9 | 6.0 |
| I/sigma | 11.5 | 58.5 | 0.1 |
| Rmerge | 0.058 | 0.035 | 2.621 |
| CC half | 0.989 | 0.983 | 0.309 |
| Anomalous completeness | 99.4 | 99.3 | 98.3 |
| Anomalous multiplicity | 2.9 | 2.9 | 2.9 |
| Cell | 128.497 | 128.497 | 127.768 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
