Data DOI: 10.15785/SBGRID/411 | ID: 411
5WQ5 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Murthy Laboratory, Indian Institute of Science
Release Date: 20 Dec 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/411
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/411 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/411 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/411 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/411 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 411 ; shasum -c files.sha'
Storage requirements: 8.7G
Biological Sample:
Glycerol dehydrogenase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Rotating anode
Data Creation Date:
28 Jan 2014
Related Datasets:
None
Hatti, KS; Mathiharan, YK; Murthy, M; Srinivasan, N; Murthy, M. 2016. "X-Ray Diffraction data for: Glycerol dehydrogenase. PDB Code 5WQ5", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/411.
The crystal was obtained serendipitously
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kaushik S Hatti | Depositor | Molecular Biophysics Unit, Indian Institute of Science |
| Yamuna K Mathiharan | Data Collector | Molecular Biophysics Unit, Indian Institute of Science |
| MRN Murthy | Molecular Biophysics Unit, Indian Institute of Science | |
| Narayanswamy Srinivasan | Molecular Biophysics Unit, Indian Institute of Science | |
| M.R.N. Murthy | PI | Indian Institute of Science |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.5418
Sweep:
SWEEP3
Files:
/programs/datagrid/411/E112AD230AH234A_ISII59-190114-3_####.osc
Images:
1 - 471
Beam:
(150.02, 150.06) -> (150.02, 149.9)
Distance:
-230.0 -> -229.45
Spacegroup:
P 4
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.04 | 5.54 | 2.04 |
| Low resolution limit | 56.5 | 56.52 | 2.08 |
| Completeness | 71.4 | 99.9 | 12.7 |
| Multiplicity | 6.9 | 10.8 | 1.1 |
| I/sigma | 7.4 | 17.4 | 0.8 |
| Rmerge | 0.239 | 0.111 | 1.024 |
| CC half | 0.985 | 0.996 | 0.261 |
| Anomalous completeness | 54.5 | 99.7 | 0.0 |
| Anomalous multiplicity | 4.0 | 4.0 | 4.0 |
| Cell | 178.66 | 178.66 | 80.12 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.5418
Sweep:
SWEEP3
Files:
/programs/datagrid/411/E112AD230AH234A_ISII59-190114-3_####.osc
Images:
1 - 471
Beam:
(150.02, 150.06) -> (150.02, 149.91)
Distance:
-230.0 -> -230.16
Spacegroup:
P 4
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.03 | 5.51 | 2.03 |
| Low resolution limit | 56.49 | 56.51 | 2.07 |
| Completeness | 70.4 | 100.0 | 11.4 |
| Multiplicity | 6.8 | 10.8 | 1.1 |
| I/sigma | 7.4 | 17.4 | 0.8 |
| Rmerge | 0.237 | 0.111 | 1.047 |
| CC half | 0.983 | 0.988 | 0.377 |
| Anomalous completeness | 53.5 | 99.8 | 0.0 |
| Anomalous multiplicity | 3.9 | 3.9 | 3.9 |
| Cell | 178.64 | 178.64 | 80.11 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
