Data DOI: 10.15785/SBGRID/406 | ID: 406
Publication DOI: 10.1016/j.neuron.2016.10.058
5ICT Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Mayer Laboratory, National Institutes of Health
Release Date: Dec. 13, 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/406
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/406 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/406 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/406 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/406 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 406 ; shasum -c files.sha'
Storage requirements: 8.8G
Biological Sample:
Drosophila DGluR1A Ligand Binding Domain Y792T mutant
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline ID22, SERCAT, APS, Chicago, IL
Data Creation Date:
Feb. 16, 2016
Related Datasets:
None
Mayer, ML. 2016. "X-Ray Diffraction data for: Drosophila DGluR1A Ligand Binding Domain Y792T mutant. PDB Code 5ICT", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/406.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Mark L Mayer | Data Collector, Depositor | NIH |
| Mark Mayer | PI | National Institutes of Health |
Detector rayonix-mx300hs, x beam 149.677, y beam 144.942, distance 219.99, wavelength 1.00000
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/406/34A1b.####
Images:
1 - 320
Beam:
(149.87, 145.16) -> (149.87, 145.01)
Distance:
220.0 -> 219.95
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.53 | 4.15 | 1.53 |
| Low resolution limit | 53.2 | 53.23 | 1.56 |
| Completeness | 96.5 | 100.0 | 71.9 |
| Multiplicity | 5.9 | 6.1 | 3.5 |
| I/sigma | 11.6 | 29.7 | 0.9 |
| Rmerge | 0.075 | 0.033 | 1.007 |
| CC half | 0.998 | 0.999 | 0.422 |
| Anomalous completeness | 96.2 | 99.9 | 69.8 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 53.202 | 58.384 | 99.75 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/406/34A1b.####
Images:
1 - 320
Beam:
(149.87, 145.16) -> (149.87, 144.94)
Distance:
220.0 -> 219.58
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.53 | 4.15 | 1.53 |
| Low resolution limit | 39.31 | 39.32 | 1.56 |
| Completeness | 96.5 | 100.0 | 72.5 |
| Multiplicity | 5.9 | 5.9 | 3.5 |
| I/sigma | 16.8 | 49.0 | 1.0 |
| Rmerge | 0.05 | 0.021 | 0.949 |
| CC half | 0.999 | 0.999 | 0.485 |
| Anomalous completeness | 95.9 | 99.7 | 70.1 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 53.18 | 58.37 | 99.75 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/406/34A1b.####
Images:
1 - 320
Beam:
(149.87, 145.16) -> (149.87, 144.95)
Distance:
220.0 -> 219.83
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.53 | 4.15 | 1.53 |
| Low resolution limit | 46.93 | 46.95 | 1.56 |
| Completeness | 96.5 | 100.0 | 72.5 |
| Multiplicity | 5.9 | 5.9 | 3.5 |
| I/sigma | 16.8 | 49.0 | 1.0 |
| Rmerge | 0.05 | 0.021 | 0.946 |
| CC half | 0.999 | 0.999 | 0.483 |
| Anomalous completeness | 95.9 | 99.7 | 70.1 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 53.18 | 58.37 | 99.75 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/406/34A1b.####
Images:
1 - 320
Beam:
(149.87, 145.16) -> (149.87, 144.95)
Distance:
220.0 -> 219.47
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.56 | 4.23 | 1.56 |
| Low resolution limit | 49.83 | 49.85 | 1.59 |
| Completeness | 97.9 | 100.0 | 79.3 |
| Multiplicity | 6.1 | 6.1 | 3.7 |
| I/sigma | 12.3 | 30.5 | 1.1 |
| Rmerge | 0.06 | 0.028 | 0.84 |
| CC half | 0.999 | 0.999 | 0.701 |
| Anomalous completeness | 97.6 | 100.0 | 78.5 |
| Anomalous multiplicity | 3.2 | 3.2 | 3.2 |
| Cell | 53.099 | 58.267 | 99.658 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
