X-Ray Diffraction data from Drosophila DGluR1A Ligand Binding Domain glutamate complex, source of 5DT6 structure

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Data DOI: 10.15785/SBGRID/405 | ID: 405

Publication DOI: 10.1016/j.neuron.2016.10.058

5DT6 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Mayer Laboratory, National Institutes of Health

Release Date: 13 Dec 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/405

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/405 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/405 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/405 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/405 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 405 ; shasum -c files.sha'

Storage requirements: 4.4G

Biological Sample:

Drosophila DGluR1A Ligand Binding Domain glutamate complex

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

Beamline ID22, SERCAT, APS, Chicago, IL

Data Creation Date:

23 Oct 2014

Related Datasets:

None


Cite this Dataset

Dharkar, P; Mayer, ML. 2016. "X-Ray Diffraction data for: Drosophila DGluR1A Ligand Binding Domain glutamate complex. PDB Code 5DT6", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/405.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Mark L MayerData Collector, DepositorNIH
Poorva DharkarData CollectorNIH
Mark MayerPINational Institutes of Health

Reprocessing Instructions

Detector MAR 300 CCD, x beam 150.011, y beam 144.093, distance 200.18, wavelength 1.00000

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3d mosflm_beam_centre=151.01,144.20 read_all_image_headers=False /programs/datagrid//405/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3dii mosflm_beam_centre=151.01,144.20 read_all_image_headers=False /programs/datagrid//405/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=dials mosflm_beam_centre=151.01,144.20 read_all_image_headers=False /programs/datagrid//405/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.