Data DOI: 10.15785/SBGRID/404 | ID: 404
Publication DOI: 10.1016/j.neuron.2016.10.058
5EHS Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Mayer Laboratory, National Institutes of Health
Release Date: 13 Dec 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/404
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/404 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/404 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/404 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/404 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 404 ; shasum -c files.sha'
Storage requirements: 11G
Biological Sample:
Drosophila KaiR1D Ligand Binding Domain AP5 complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline ID22, SERCAT, APS, Chicago, Illinois
Data Creation Date:
23 Oct 2015
Related Datasets:
None
Dharkar, P; Mayer, ML. 2016. "X-Ray Diffraction data for: Drosophila KaiR1D Ligand Binding Domain AP5 complex. PDB Code 5EHS", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/404.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Mark L Mayer | Data Collector, Depositor | NIH |
| Poorva Dharkar | Data Collector | NIH |
| Mark Mayer | PI | National Institutes of Health |
Detector rayonix-mx300hs, x beam 150.071, y beam 144.750, distance 199.88, wavelength 1.00000
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/404/55D2b.####
Images:
1 - 400
Beam:
(149.87, 145.16) -> (149.87, 144.77)
Distance:
200.0 -> 199.95
Spacegroup:
P 31
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.65 | 4.48 | 1.65 |
| Low resolution limit | 39.92 | 39.93 | 1.68 |
| Completeness | 99.4 | 96.6 | 100.0 |
| Multiplicity | 3.1 | 3.1 | 3.1 |
| I/sigma | 11.7 | 26.8 | 1.0 |
| Rmerge | 0.039 | 0.029 | 1.008 |
| CC half | 0.998 | 0.996 | 0.295 |
| Anomalous completeness | 81.2 | 83.8 | 78.5 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 54.74 | 54.74 | 148.06 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/404/55D2b.####
Images:
1 - 400
Beam:
(149.87, 145.16) -> (149.87, 144.76)
Distance:
200.0 -> 200.35
Spacegroup:
P 31
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.65 | 4.48 | 1.65 |
| Low resolution limit | 39.92 | 39.93 | 1.68 |
| Completeness | 99.3 | 96.5 | 100.0 |
| Multiplicity | 3.1 | 3.1 | 3.1 |
| I/sigma | 11.7 | 26.9 | 1.0 |
| Rmerge | 0.039 | 0.029 | 1.009 |
| CC half | 0.998 | 0.994 | 0.312 |
| Anomalous completeness | 81.2 | 83.8 | 78.5 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 54.74 | 54.74 | 148.06 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/404/55D2b.####
Images:
1 - 400
Beam:
(149.87, 145.16) -> (149.87, 144.76)
Distance:
200.0 -> 200.45
Spacegroup:
P 31
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.61 | 4.37 | 1.61 |
| Low resolution limit | 47.41 | 47.43 | 1.64 |
| Completeness | 99.8 | 99.0 | 97.3 |
| Multiplicity | 3.2 | 3.3 | 3.1 |
| I/sigma | 8.3 | 51.2 | 0.0 |
| Rmerge | 0.06 | 0.044 | 3.303 |
| CC half | 0.995 | 0.988 | 0.319 |
| Anomalous completeness | 84.6 | 93.4 | 76.6 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 54.739 | 54.739 | 147.975 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
