Data DOI: 10.15785/SBGRID/398 | ID: 398
Publication DOI: 10.1101/gad.296145.117
53VN Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Corbett Laboratory, University of California, San Diego
Release Date: 9 May 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/398
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/398 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/398 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/398 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/398 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 398 ; shasum -c files.sha'
Storage requirements: 4.7G
Biological Sample:
Csm1-Ulp2-Tof2 complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24ID-C
Data Creation Date:
28 Nov 2016
Related Datasets:
None
Singh, N; Corbett, KD. 2017. "X-Ray Diffraction data for: Csm1-Ulp2-Tof2 complex. PDB Code 53VN", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/398.
Native dates for Csm1 bound to Ulp2-Tof2 fusion
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin D Corbett | Depositor | UC San Diego |
| Namit Singh | Data Collector | UC San Diego |
| Kevin Corbett | PI | University of California, San Diego |
Process using XDS to 1.3 A
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/398/UCSD8_8_1_####.cbf
Images:
1 - 800
Beam:
(216.87, 223.15) -> (216.87, 223.1)
Distance:
200.0 -> 199.24
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.3 | 3.53 | 1.3 |
| Low resolution limit | 23.81 | 23.82 | 1.32 |
| Completeness | 95.9 | 95.4 | 91.9 |
| Multiplicity | 3.6 | 3.5 | 3.7 |
| I/sigma | 5.4 | 15.1 | 0.5 |
| Rmerge | 0.065 | 0.031 | 6.414 |
| CC half | 0.996 | 0.995 | 0.304 |
| Anomalous completeness | 86.4 | 82.6 | 83.7 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 40.98 | 56.92 | 61.51 | 90.0 | 93.74 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/398/UCSD8_8_1_####.cbf
Images:
1 - 800
Beam:
(216.87, 223.15) -> (216.87, 223.09)
Distance:
200.0 -> 199.67
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.3 | 3.53 | 1.3 |
| Low resolution limit | 35.1 | 35.12 | 1.32 |
| Completeness | 96.0 | 95.4 | 92.0 |
| Multiplicity | 3.7 | 3.5 | 3.7 |
| I/sigma | 5.4 | 15.0 | 0.5 |
| Rmerge | 0.065 | 0.031 | 6.44 |
| CC half | 0.995 | 0.995 | 0.308 |
| Anomalous completeness | 86.5 | 82.8 | 83.9 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 40.98 | 56.92 | 61.51 | 90.0 | 93.74 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/398/UCSD8_8_1_####.cbf
Images:
1 - 800
Beam:
(216.87, 223.15) -> (216.87, 223.09)
Distance:
200.0 -> 199.82
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.45 | 3.94 | 1.45 |
| Low resolution limit | 41.75 | 41.77 | 1.48 |
| Completeness | 89.9 | 90.9 | 87.9 |
| Multiplicity | 2.1 | 2.2 | 2.1 |
| I/sigma | 9.2 | 59.5 | 0.3 |
| Rmerge | 0.041 | 0.028 | 0.394 |
| CC half | 0.976 | 0.97 | 0.202 |
| Anomalous completeness | 71.0 | 85.0 | 63.1 |
| Anomalous multiplicity | 1.2 | 1.2 | 1.2 |
| Cell | 40.993 | 45.769 | 45.776 | 76.91 | 66.156 | 66.134 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
