X-Ray Diffraction data from integrin alphaVbeta6 head, source of 5FFG structure

Data DOI: 10.15785/SBGRID/391 | ID: 391

Publication DOI: 10.1038/nature21035

5FFG Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Springer Laboratory, Children's Hospital Boston

Release Date: Dec. 13, 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/391

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/391 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/391 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/391 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/391 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 391 ; shasum -c files.sha'

Storage requirements: 4.9G

Biological Sample:

integrin alphaVbeta6 head

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

GM/CA-CAT beamline 23-ID at the Advanced Photon Source

Data Creation Date:

Nov. 6, 2013

Related Datasets:

None


Cite this Dataset

Dong, X; Springer, T. 2016. "X-Ray Diffraction data for: integrin alphaVbeta6 head. PDB Code 5FFG", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/391.

Download Citation

Dataset Description

X-ray diffraction

Project Members

Name Additional Roles Affiliation While Working on the Project
Xianchi DongData Collector, DepositorBoston Children's Hospital
Timothy SpringerPIChildren's Hospital Boston

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.03318

Sweep:

SWEEP1

Files:

/programs/datagrid/391/D7_1.####

Images:

1 - 152

Beam:

(150.0, 150.0) -> (150.0, 150.0)

Distance:

250.0 -> 249.36

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.04 5.53 2.04
Low resolution limit 46.94 46.96 2.08
Completeness 99.2 95.2 100.0
Multiplicity 3.1 3.1 3.1
I/sigma 4.1 9.5 1.1
Rmerge 0.119 0.04 0.721
CC half 0.989 0.995 0.469
Anomalous completeness 95.9 91.8 98.7
Anomalous multiplicity 1.6 1.6 1.6
Cell 215.894 77.723 59.048 90.0 101.769 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.03318

Sweep:

SWEEP1

Files:

/programs/datagrid/391/D7_1.####

Images:

1 - 152

Beam:

(150.0, 150.0) -> (150.0, 149.89)

Distance:

250.0 -> 245.94

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.08 5.64 2.08
Low resolution limit 46.89 46.9 2.12
Completeness 98.8 95.1 99.8
Multiplicity 3.1 3.1 3.1
I/sigma 8.3 23.2 1.3
Rmerge 0.064 0.03 0.835
CC half 0.996 0.995 0.494
Anomalous completeness 91.4 83.9 97.9
Anomalous multiplicity 1.7 1.7 1.7
Cell 215.57 77.54 58.94 90.0 101.5 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.03318

Sweep:

SWEEP1

Files:

/programs/datagrid/391/D7_1.####

Images:

1 - 152

Beam:

(150.0, 150.0) -> (150.0, 149.88)

Distance:

250.0 -> 248.32

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.07 5.62 2.07
Low resolution limit 57.75 57.77 2.11
Completeness 98.8 95.1 99.8
Multiplicity 3.1 3.1 3.1
I/sigma 8.2 23.2 1.2
Rmerge 0.064 0.03 0.902
CC half 0.996 0.994 0.448
Anomalous completeness 91.5 83.7 98.1
Anomalous multiplicity 1.7 1.7 1.7
Cell 215.53 77.53 58.93 90.0 101.5 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.03318

Sweep:

SWEEP1

Files:

/programs/datagrid/391/D7_1.####

Images:

1 - 152

Beam:

(150.0, 150.0) -> (150.0, 149.96)

Distance:

250.0 -> 246.38

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.35 6.37 2.35
Low resolution limit 46.91 46.92 2.39
Completeness 98.3 94.0 90.8
Multiplicity 3.2 3.2 3.1
I/sigma 5.0 9.0 1.5
Rmerge 0.109 0.042 0.725
CC half 0.987 0.993 0.402
Anomalous completeness 94.6 90.8 89.3
Anomalous multiplicity 1.7 1.7 1.7
Cell 214.422 77.246 59.247 90.0 101.31 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.