Data DOI: 10.15785/SBGRID/391 | ID: 391
Publication DOI: 10.1038/nature21035
5FFG Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Springer Laboratory, Children's Hospital Boston
Release Date: 13 Dec 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/391
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/391 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/391 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/391 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/391 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 391 ; shasum -c files.sha'
Storage requirements: 4.9G
Biological Sample:
integrin alphaVbeta6 head
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
GM/CA-CAT beamline 23-ID at the Advanced Photon Source
Data Creation Date:
6 Nov 2013
Related Datasets:
None
Dong, X; Springer, T. 2016. "X-Ray Diffraction data for: integrin alphaVbeta6 head. PDB Code 5FFG", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/391.
X-ray diffraction
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Xianchi Dong | Data Collector, Depositor | Boston Children's Hospital |
| Timothy Springer | PI | Children's Hospital Boston |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.03318
Sweep:
SWEEP1
Files:
/programs/datagrid/391/D7_1.####
Images:
1 - 152
Beam:
(150.0, 150.0) -> (150.0, 149.88)
Distance:
250.0 -> 245.76
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.01 | 5.45 | 2.01 |
| Low resolution limit | 46.9 | 46.91 | 2.04 |
| Completeness | 99.0 | 95.4 | 99.9 |
| Multiplicity | 3.1 | 3.1 | 3.1 |
| I/sigma | 7.5 | 22.2 | 1.0 |
| Rmerge | 0.072 | 0.031 | 1.148 |
| CC half | 0.995 | 0.994 | 0.367 |
| Anomalous completeness | 92.5 | 83.7 | 98.5 |
| Anomalous multiplicity | 1.6 | 1.6 | 1.6 |
| Cell | 215.46 | 77.51 | 58.95 | 90.0 | 101.48 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.03318
Sweep:
SWEEP1
Files:
/programs/datagrid/391/D7_1.####
Images:
1 - 152
Beam:
(150.0, 150.0) -> (150.0, 149.88)
Distance:
250.0 -> 248.19
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.01 | 5.46 | 2.01 |
| Low resolution limit | 72.75 | 72.8 | 2.04 |
| Completeness | 99.0 | 95.4 | 99.9 |
| Multiplicity | 3.1 | 3.1 | 3.1 |
| I/sigma | 7.5 | 22.3 | 1.0 |
| Rmerge | 0.072 | 0.031 | 1.131 |
| CC half | 0.995 | 0.994 | 0.374 |
| Anomalous completeness | 92.5 | 83.7 | 98.6 |
| Anomalous multiplicity | 1.6 | 1.6 | 1.6 |
| Cell | 215.44 | 77.5 | 58.93 | 90.0 | 101.48 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.03318
Sweep:
SWEEP1
Files:
/programs/datagrid/391/D7_1.####
Images:
1 - 152
Beam:
(150.0, 150.0) -> (150.0, 149.97)
Distance:
250.0 -> 247.0
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.34 | 6.35 | 2.34 |
| Low resolution limit | 52.63 | 52.65 | 2.38 |
| Completeness | 98.8 | 96.2 | 96.4 |
| Multiplicity | 3.2 | 3.3 | 3.2 |
| I/sigma | 14.6 | 42.2 | 2.1 |
| Rmerge | 0.092 | 0.052 | 0.654 |
| CC half | 0.988 | 0.981 | 0.556 |
| Anomalous completeness | 95.5 | 94.4 | 95.5 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 214.698 | 77.337 | 59.323 | 90.0 | 101.31 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
