Data DOI: 10.15785/SBGRID/390 | ID: 390
5H4H Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Murthy Laboratory, Indian Institute of Science
Release Date: 25 Nov 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/390
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/390 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/390 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/390 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/390 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 390 ; shasum -c files.sha'
Storage requirements: 1.1G
Biological Sample:
Putative PIN domain (VapC4 toxin)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ESRF BM14
Data Creation Date:
10 Jan 2011
Related Datasets:
None
Hatti, K; Biswas, A; k, S; Murthy, M. 2016. "X-Ray Diffraction data for: Putative PIN domain (VapC4 toxin). PDB Code 5H4H", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/390.
Native VapC4 dataset at 2.2A
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kaushik Hatti | Depositor | MBU, IISc |
| Ansuman Biswas | Data Collector | CDC, IISc |
| Sekar k | CDS, IISc | |
| M.R.N. Murthy | PI | Indian Institute of Science |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/390/hypo_adtv36_soak1_###.mar2300
Images:
1 - 328
Beam:
(172.5, 172.5) -> (172.5, 173.06)
Distance:
200.0 -> 199.54
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.22 | 5.99 | 2.22 |
| Low resolution limit | 22.48 | 22.48 | 2.26 |
| Completeness | 99.5 | 100.0 | 91.6 |
| Multiplicity | 3.3 | 3.2 | 2.9 |
| I/sigma | 9.7 | 28.6 | 2.2 |
| Rmerge | 0.082 | 0.023 | 0.459 |
| CC half | 0.996 | 0.998 | 0.688 |
| Anomalous completeness | 94.6 | 95.3 | 75.0 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 51.85 | 45.19 | 53.57 | 90.0 | 104.69 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/390/hypo_adtv36_soak1_###.mar2300
Images:
1 - 328
Beam:
(172.5, 172.5) -> (172.5, 173.09)
Distance:
200.0 -> 199.23
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.11 | 5.73 | 2.11 |
| Low resolution limit | 45.23 | 45.24 | 2.15 |
| Completeness | 94.7 | 100.0 | 84.8 |
| Multiplicity | 3.3 | 3.3 | 2.4 |
| I/sigma | 11.8 | 24.8 | -0.1 |
| Rmerge | 0.101 | 0.038 | -0.357 |
| CC half | 0.931 | 0.997 | 0.304 |
| Anomalous completeness | 88.9 | 100.0 | 60.3 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 51.884 | 45.234 | 53.58 | 90.0 | 104.73 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
